RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 COX6A1P12074 109 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 FRKP42685 505 aaPredicted RBP16.2■□□□□ 0.18
CPSF4-209ENST00000465132 CLCN2P51788 898 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 NME5P56597 212 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 PSPHP78330 225 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 ARG2P78540 354 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 PRR5P85299 388 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 PCOLCEQ15113 449 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 MAPKAPK3Q16644 382 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 AGKQ53H12 422 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 ZNF324BQ6AW86 544 aaPredicted RBP16.2■□□□□ 0.18
CPSF4-209ENST00000465132 VWA5B2Q8N398 1253 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 OR5L2Q8NGL0 311 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 BCAS4Q8TDM0 211 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 MARK4Q96L34 752 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 AMDHD1Q96NU7 426 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 CXorf21Q9HAI6 301 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 CCDC167Q9P0B6 97 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 TEKT2Q9UIF3 430 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 BTNL2Q9UIR0 455 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 EXO1Q9UQ84 846 aaKnown RBP16.2■□□□□ 0.18
CPSF4-209ENST00000465132 CAPN7Q9Y6W3 813 aa16.2■□□□□ 0.18
CPSF4-209ENST00000465132 A0A087WV62 115 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 A0A1B0GUH1 482 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 OR2W5A6NFC9 320 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 TTC36A6NLP5 189 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 CDK2AP1O14519 115 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 HNRNPRO43390 633 aaKnown RBP16.19■□□□□ 0.18
CPSF4-209ENST00000465132 SEC24DO94855 1032 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-209ENST00000465132 TNFSF10P50591 281 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 SLC26A5P58743 744 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 STX5Q13190 355 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 RCAN2Q14206 197 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 ZNF267Q14586 743 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-209ENST00000465132 BTBD16Q32M84 506 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 BLOC1S3Q6QNY0 202 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 FJX1Q86VR8 437 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 MMP21Q8N119 569 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 OR8K3Q8NH51 312 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 BRIX1Q8TDN6 353 aaKnown RBP16.19■□□□□ 0.18
CPSF4-209ENST00000465132 PTPMT1Q8WUK0 201 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-209ENST00000465132 SENP5Q96HI0 755 aaPredicted RBP16.19■□□□□ 0.18
CPSF4-209ENST00000465132 ITCHQ96J02 903 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 IMMP1LQ96LU5 166 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 LRRC37BQ96QE4 947 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 TAAR6Q96RI8 345 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 CNPPD1Q9BV87 410 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 OR8D2Q9GZM6 311 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 MMP25Q9NPA2 562 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 SAR1AQ9NR31 198 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 TAS2R9Q9NYW1 312 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 PLA2G3Q9NZ20 509 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 PRODH2Q9UF12 536 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 CLDN16Q9Y5I7 305 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 CRYBG3Q68DQ2 2970 aa16.19■□□□□ 0.18
CPSF4-209ENST00000465132 TRAV17A0A0B4J275 112 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 A8MUA0 341 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 PLOD2O00469 737 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 ANGPT2O15123 496 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 PLOD3O60568 738 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 PRAMEF2O60811 474 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 SNRPB2P08579 225 aaKnown RBP16.18■□□□□ 0.18
CPSF4-209ENST00000465132 TDGF1P3P51864 188 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 INAQ16352 499 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 PRICKLE4Q2TBC4 344 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 SPANXN4Q5MJ08 99 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 HLA-DQA1Q5Y7H0 255 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 OR4F3Q6IEY1 312 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 ANKRD26P1Q6NSI1 321 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 PAOXQ6QHF9 649 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 HSDL2Q6YN16 418 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 RNF111Q6ZNA4 994 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 SLC29A4Q7RTT9 530 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 SLC2A12Q8TD20 617 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 HAS2Q92819 552 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 RELTQ969Z4 430 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 MARVELD3Q96A59 401 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 PPWD1Q96BP3 646 aaKnown RBP16.18■□□□□ 0.18
CPSF4-209ENST00000465132 CMTM5Q96DZ9 223 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 SPDL1Q96EA4 605 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 GLIPR2Q9H4G4 154 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 DDX18Q9NVP1 670 aaKnown RBP16.18■□□□□ 0.18
CPSF4-209ENST00000465132 ABI3Q9P2A4 366 aa16.18■□□□□ 0.18
CPSF4-209ENST00000465132 DIDO1Q9BTC0 2240 aaKnown RBP16.18■□□□□ 0.18
CPSF4-209ENST00000465132 WASHC1A8K0Z3 465 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 BBIP1A8MTZ0 92 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 TGFBR3LH3BV60 316 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 ZFAND5O76080 213 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 ANP32DO95626 131 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 KRT16P08779 473 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 PRF1P14222 555 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 TRPC1P48995 793 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 ANXA11P50995 505 aaKnown RBP16.17■□□□□ 0.18
CPSF4-209ENST00000465132 DCAF7P61962 342 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 TXNL4AP83876 142 aaKnown RBP16.17■□□□□ 0.18
CPSF4-209ENST00000465132 FUT7Q11130 342 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 SF3A3Q12874 501 aaKnown RBP eCLIP16.17■□□□□ 0.185e-9■■■□□ 18.5
CPSF4-209ENST00000465132 HSPB3Q12988 150 aa16.17■□□□□ 0.18
CPSF4-209ENST00000465132 ZNHIT3Q15649 155 aaPredicted RBP16.17■□□□□ 0.18
CPSF4-209ENST00000465132 SPDYE7PQ495Y7 208 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms