RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PERM1Q5SV97 790 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 C6orf120Q7Z4R8 191 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 LGI4Q8N135 537 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 OR52J3Q8NH60 311 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 PSMA8Q8TAA3 256 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SLC38A5Q8WUX1 472 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 FAR1Q8WVX9 515 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 APH1BQ8WW43 257 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 UBE2FQ969M7 185 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 ZBED6CLQ96FA7 236 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SMIM10Q96HG1 83 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 TMEM19Q96HH6 336 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 HRASLS5Q96KN8 279 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 RHNO1Q9BSD3 238 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SERHL2Q9H4I8 314 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 PDE7BQ9NP56 450 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 STARD5Q9NSY2 213 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 ACSS1Q9NUB1 689 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 RLIMQ9NVW2 624 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 TPRKBQ9Y3C4 175 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 PCDHGB1Q9Y5G3 927 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 MN1Q10571 1320 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 ASXL3Q9C0F0 2248 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 LNP1A1A4G5 178 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SRPX2O60687 465 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 WBP4O75554 376 aaKnown RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 CCNA2P20248 432 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 FUT4P22083 530 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 STT3AP46977 705 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 LIMS1P48059 325 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 EMX1Q04741 257 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 NFATC3Q12968 1075 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 MLC1Q15049 377 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 MAPK11Q15759 364 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 MICAQ29983 383 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SPDYE7PQ495Y7 208 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 DEFB134Q4QY38 66 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SNAP47Q5SQN1 464 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 NDUFAF5Q5TEU4 345 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 MRM1Q6IN84 353 aaKnown RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 WDR74Q6RFH5 385 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 Q6ZPB1 254 aaPredicted RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 ABHD13Q7L211 337 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 ENTHD1Q8IYW4 607 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 CARFQ8N187 725 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 RAB2BQ8WUD1 216 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 APOBEC4Q8WW27 367 aaKnown RBP13.64□□□□□ -0.23
COL5A1-205ENST00000464187 RAB8BQ92930 207 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 NAT6Q93015 286 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 FKBP10Q96AY3 582 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 CSF3RQ99062 836 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 PIP5K1AQ99755 562 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 NUDT22Q9BRQ3 303 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 CHRNA10Q9GZZ6 450 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 ACER3Q9NUN7 267 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SCN3BQ9NY72 215 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 SH3GLB1Q9Y371 365 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 PCDHGA10Q9Y5H3 936 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 ENPP4Q9Y6X5 453 aa13.64□□□□□ -0.23
COL5A1-205ENST00000464187 ZNF99A8MXY4 864 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-205ENST00000464187 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 HMGN4O00479 90 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 FAM20BO75063 409 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 PRKRAO75569 313 aaKnown RBP13.63□□□□□ -0.23
COL5A1-205ENST00000464187 TFPTP0C1Z6 253 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 DRD2P14416 443 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 ALOX12P18054 663 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 MAP2K4P45985 399 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 GABRA4P48169 554 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 SEPHS1P49903 392 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 NPTX1Q15818 432 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 DUSP7Q16829 419 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 SLC16A12Q6ZSM3 486 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 OR9Q2Q8NGE9 314 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 DTNBP1Q96EV8 351 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 NIPSNAP1Q9BPW8 284 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 FUNDC2Q9BWH2 189 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 RSPO3Q9BXY4 272 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-205ENST00000464187 ROGDIQ9GZN7 287 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 GLIPR2Q9H4G4 154 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 GPN2Q9H9Y4 310 aaPredicted RBP13.63□□□□□ -0.23
COL5A1-205ENST00000464187 RASSF1Q9NS23 344 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 TAS2R7Q9NYW3 318 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 FBXW2Q9UKT8 454 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 RNF6Q9Y252 685 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 POFUT2Q9Y2G5 429 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 MRPS2Q9Y399 296 aaKnown RBP13.63□□□□□ -0.23
COL5A1-205ENST00000464187 ATG4BQ9Y4P1 393 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 ASB4Q9Y574 426 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 CACNA1HO95180 2353 aa13.63□□□□□ -0.23
COL5A1-205ENST00000464187 A0A1W2PQM1 296 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 MT-ND2P03891 347 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 CKMT1AP12532 417 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 ANXA8P13928 327 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 GGT2P36268 569 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 GSSP48637 474 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 MASP1P48740 699 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 CCT3P49368 545 aaKnown RBP13.62□□□□□ -0.23
COL5A1-205ENST00000464187 EMP3P54852 163 aa13.62□□□□□ -0.23
COL5A1-205ENST00000464187 DAB2P98082 770 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms