RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 TRMT12Q53H54 448 aaKnown RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 SLC22A16Q86VW1 577 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 CPSF7Q8N684 471 aaKnown RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 ZNF781Q8N8C0 355 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 ADCY4Q8NFM4 1077 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 PRR7Q8TB68 274 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 AGR3Q8TD06 166 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 DOK4Q8TEW6 326 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 RELTQ969Z4 430 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 TUBGCP3Q96CW5 907 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 ZBED6CLQ96FA7 236 aaPredicted RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 PAIP2Q9BPZ3 127 aaKnown RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 ITPAQ9BY32 194 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 TAS2R9Q9NYW1 312 aa12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 BOKQ9UMX3 212 aaPredicted RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 C19orf53Q9UNZ5 99 aaPredicted RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 GPR55Q9Y2T6 319 aaPredicted RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 CHCHD2Q9Y6H1 151 aaPredicted RBP12.04□□□□□ -0.48
R3HDM1-213ENST00000463230 SLCO1B7G3V0H7 640 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 KLF11O14901 512 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 TFECO14948 347 aaPredicted RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 ASNA1O43681 348 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 SKAP2O75563 359 aaPredicted RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 PPM1BO75688 479 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 GLSO94925 669 aaPredicted RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 UNC5CO95185 931 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 ST13P50502 369 aaKnown RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 PAOXQ6QHF9 649 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 Q6ZPB1 254 aaPredicted RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 NUP54Q7Z3B4 507 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 SLC34A3Q8N130 599 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 OR2L13Q8N349 312 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 SPPL2AQ8TCT8 520 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 EGLN2Q96KS0 407 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 ATP6V1G3Q96LB4 118 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 C3orf30Q96M34 536 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 TSSK3Q96PN8 268 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 PRPF18Q99633 342 aaKnown RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 GLIPR2Q9H4G4 154 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 DEPPQ9NTK1 212 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 ATAD3AQ9NVI7 634 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 QPCTLQ9NXS2 382 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 NOP53Q9NZM5 478 aaKnown RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 CNOT11Q9UKZ1 510 aaKnown RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 TENM4Q6N022 2769 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 SCAMP2O15127 329 aaKnown RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 PEX11AO75192 247 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 SNNO75324 88 aaPredicted RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 SNX4O95219 450 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 CCL3P10147 92 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 PRPS1L1P21108 318 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 CASP6P55212 293 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 MRPS22P82650 360 aaKnown RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 EIF2S3LQ2VIR3 472 aaKnown RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 MTFR2Q6P444 385 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 FAM47EQ6ZV65 393 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 GOLGA6L1Q8N7Z2 621 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 FNDC5Q8NAU1 212 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 OR7G2Q8NG99 324 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 MAGED4Q96JG8 741 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 VSTM2LQ96N03 204 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 SH3GL2Q99962 352 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 NXF5Q9H1B4 397 aaKnown RBP12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 NTMQ9P121 344 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 ZNF835Q9Y2P0 537 aa12.03□□□□□ -0.48
R3HDM1-213ENST00000463230 NPIPA5E9PKD4 350 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 AGFG2O95081 481 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 PSMG1O95456 288 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 JUNP05412 331 aaKnown RBP12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 ABCD3P28288 659 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 MRPS35P82673 323 aaKnown RBP12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 PLGLB1Q02325 96 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 SRSF1Q07955 248 aaKnown RBP eCLIP12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 SNTA1Q13424 505 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 PRSS53Q2L4Q9 553 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 LIX1Q8N485 282 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 FAM13CQ8NE31 585 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 SSC4DQ8WTU2 575 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 KAT2AQ92830 837 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 NTNG2Q96CW9 530 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 ELP4Q96EB1 424 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 ZDHHC11Q9H8X9 412 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 MEAF6Q9HAF1 191 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 FOLH1BQ9HBA9 442 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 NPIPA1Q9UND3 350 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 OSGIN2Q9Y236 505 aa12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.02□□□□□ -0.48
R3HDM1-213ENST00000463230 ZGRF1Q86YA3 2104 aa12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 TRPC5OSA6NMA1 111 aa12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 HMGB1P1B2RPK0 211 aaPredicted RBP12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 ERN1O75460 977 aaKnown RBP12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 PLCXD2Q0VAA5 305 aa12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 EFR3AQ14156 821 aa12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 RNFT1Q5M7Z0 435 aa12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 IL23RQ5VWK5 629 aa12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 CAMKMTQ7Z624 323 aa12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 EID3Q8N140 333 aa12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 FAM109AQ8N4B1 249 aa12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 OR10G3Q8NGC4 313 aa12.02□□□□□ -0.49
R3HDM1-213ENST00000463230 CEP70Q8NHQ1 597 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms