RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	ZDHHC24	Q6UX98	284 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	ANGPTL8	Q6UXH0	198 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	RAPH1	Q70E73	1250 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	TBC1D1	Q86TI0	1168 aa	Predicted RBP	10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	CIART	Q8N365	385 aa	Predicted RBP	10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	PPM1N	Q8N819	430 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	OR52B6	Q8NGF0	335 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	OR1J4	Q8NGS1	313 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	FBF1	Q8TES7	1133 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	MARK4	Q96L34	752 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	ZFP3	Q96NJ6	502 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	CDK15	Q96Q40	435 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	CENPK	Q9BS16	269 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	RBM24	Q9BX46	236 aa	Known RBP	10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	DPH5	Q9H2P9	285 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	IPPK	Q9H8X2	491 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	ZBTB26	Q9HCK0	441 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	MAT2B	Q9NZL9	334 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	TXNDC16	Q9P2K2	825 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	ADAM29	Q9UKF5	820 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	ACOT9	Q9Y305	439 aa		10.14	□□□□□ -0.79
PTPN7-204	ENST00000462815	JMJD1C	Q15652	2540 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	C2orf72	A6NCS6	295 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	FAM187A	A6NFU0	413 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	SYCE1L	A8MT33	242 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815		A8MXE2	369 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	DEFB108A	A8MXU0	73 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	T	O15178	435 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	RAD51C	O43502	376 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	ALDOA	P04075	364 aa	Known RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	CTAGE8	P0CG41	777 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	PIK3R1	P27986	724 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	LOX	P28300	417 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	ADSL	P30566	484 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	CCKAR	P32238	428 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	PCYT1A	P49585	367 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	EMD	P50402	254 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	XK	P51811	444 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	CLDN18	P56856	261 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	NRG3	P56975	720 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	NKX6-1	P78426	367 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	GALNT1	Q10472	559 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	EXOSC7	Q15024	291 aa	Known RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	ACAP2	Q15057	778 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	TRADD	Q15628	312 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	TECRL	Q5HYJ1	363 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	UBAP2	Q5T6F2	1119 aa	Known RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	SLC30A6	Q6NXT4	461 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	SLC48A1	Q6P1K1	146 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	METTL2B	Q6P1Q9	378 aa	Known RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	TAOK1	Q7L7X3	1001 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	NUP54	Q7Z3B4	507 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	LUZP2	Q86TE4	346 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	MYLK4	Q86YV6	388 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	CTAGE4	Q8IX94	777 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	CTAGE3P	Q8IX95	158 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	VWA5B2	Q8N398	1253 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	METTL4	Q8N3J2	472 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	OR4K14	Q8NGD5	310 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	IGFBPL1	Q8WX77	278 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	WNT2B	Q93097	391 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	ISL2	Q96A47	359 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	REPS1	Q96D71	796 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	OMA1	Q96E52	524 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	ZNF681	Q96N22	645 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	SERPINI1	Q99574	410 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	OSBPL11	Q9BXB4	747 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	MRPL1	Q9BYD6	325 aa	Known RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	L2HGDH	Q9H9P8	463 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	WDR41	Q9HAD4	459 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	NEUROD4	Q9HD90	331 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	SERHL	Q9NQF3	203 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	RNF14	Q9UBS8	474 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	EXO1	Q9UQ84	846 aa	Known RBP	10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	PCDHA9	Q9Y5H5	950 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	MXRA5	Q9NR99	2828 aa		10.13	□□□□□ -0.79
PTPN7-204	ENST00000462815	MED12L	Q86YW9	2145 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815		A0A087X1B8	175 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	C17orf51	A8MQB3	221 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	CDH16	O75309	829 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	ERN1	O75460	977 aa	Known RBP	10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	KLHL2	O95198	593 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	CLDN9	O95484	217 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	TGM6	O95932	706 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	KLK1	P06870	262 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	CYP4B1	P13584	511 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	POR	P16435	677 aa	Predicted RBP	10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	ZNF708	P17019	499 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	NT5E	P21589	574 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	CNTF	P26441	200 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	GAS1	P54826	345 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	B3GALT5-AS1	P59052	145 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	RPP38	P78345	283 aa	Known RBP	10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	PHEX	P78562	749 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	HMGCS1	Q01581	520 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	NAB1	Q13506	487 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	RCAN2	Q14206	197 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	SHE	Q5VZ18	495 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	HLA-DQA1	Q5Y7H0	255 aa		10.12	□□□□□ -0.79
PTPN7-204	ENST00000462815	CLEC9A	Q6UXN8	241 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms