RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 A8MT66 165 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 C4orf51C9J302 202 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 G3V2L1 256 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 K7EPI3 171 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 E2F3O00716 465 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 PPP6CO00743 305 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 SPRY2O43597 315 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 DNAJB6O75190 326 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 ONECUT2O95948 504 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 MT-ND3P03897 115 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 EIF2S1P05198 315 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 TUBBP07437 444 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 RBP1P09455 135 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 C1GALT1C1LP0DN25 315 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 HRH2P25021 359 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 CASP2P42575 452 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 GSTM5P46439 218 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 CCR8P51685 355 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 RPS15AP62244 130 aaKnown RBP7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 VAMP2P63027 116 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 ABHD18Q0P651 414 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 DOC2AQ14183 400 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 TCTE1Q5JU00 501 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 C1orf189Q5VU69 101 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 ATG9BQ674R7 924 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 CYB5D1Q6P9G0 228 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 C19orf48Q6RUI8 117 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 TTLL10Q6ZVT0 673 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 RHOUQ7L0Q8 258 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 PRSS41Q7RTY9 318 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 LRRC70Q7Z2Q7 622 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 ADCK2Q7Z695 626 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 TMPRSS11BQ86T26 416 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 C4orf33Q8N1A6 199 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 CSNK1A1LQ8N752 337 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 PTGR2Q8N8N7 351 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 MFSD9Q8NBP5 474 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 CREB3L4Q8TEY5 395 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 CT55Q8WUE5 264 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 WDR34Q96EX3 536 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 C20orf173Q96LM9 149 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 CCNL2Q96S94 520 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 KRTAP3-1Q9BYR8 98 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 ROPN1BQ9BZX4 212 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 ROPN1Q9HAT0 212 aaPredicted RBP7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 PELI2Q9HAT8 420 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 FANCEQ9HB96 536 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 CPNE5Q9HCH3 593 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 CUTCQ9NTM9 273 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 COPG2Q9UBF2 871 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 ZNF225Q9UK10 706 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 PADI1Q9ULC6 663 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 KCNE2Q9Y6J6 123 aa7.54□□□□□ -1.2
ECHDC1-212ENST00000461239 PCSK5Q92824 1860 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 IGSF10Q6WRI0 2623 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 SPENQ96T58 3664 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 CACNA1GO43497 2377 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 TRBC2A0A5B9 178 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 HYKKA2RU49 373 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 CCDC151A5D8V7 595 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 PABPN1LA6NDY0 278 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 STX16-NPEPL1H3BU86 382 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 K7ENP7 123 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 OR7A17O14581 309 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 STX16O14662 325 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 NKX2-8O15522 239 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 RRP8O43159 456 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 OR1F1O43749 312 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 PLIN3O60664 434 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 KLF7O75840 302 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 GSTA1P08263 222 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 RPS17P08708 135 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 EGR2P11161 476 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 GFAPP14136 432 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 KRT4P19013 534 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 GNAZP19086 355 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 TCN2P20062 427 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 EEF1DP29692 281 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 OR1D4P47884 311 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 EFNA3P52797 238 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 FAM3BP58499 235 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 RPS18P62269 152 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 CYP4F2P78329 520 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 NAA25Q14CX7 972 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 CDSNQ15517 529 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 PDK4Q16654 411 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 UNC50Q53HI1 259 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 ATP1A1-AS1Q5TC04 95 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 KLC3Q6P597 504 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 INO80CQ6PI98 192 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 RINLQ6ZS11 566 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 GOLGA7Q7Z5G4 137 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 MTERF4Q7Z6M4 381 aaKnown RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 LCA5Q86VQ0 697 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 RIBC1Q8N443 379 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 RNF175Q8N4F7 328 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 METTL27Q8N6F8 245 aaPredicted RBP7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 TEX9Q8N6V9 391 aa7.53□□□□□ -1.2
ECHDC1-212ENST00000461239 BANPQ8N9N5 519 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms