RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 MORN4Q8NDC4 146 aa10.34□□□□□ -0.75
APTX-209ENST00000460940 NFAM1Q8NET5 270 aaPredicted RBP10.34□□□□□ -0.75
APTX-209ENST00000460940 ADCY4Q8NFM4 1077 aa10.34□□□□□ -0.75
APTX-209ENST00000460940 OR4K14Q8NGD5 310 aa10.34□□□□□ -0.75
APTX-209ENST00000460940 BRIX1Q8TDN6 353 aaKnown RBP10.34□□□□□ -0.75
APTX-209ENST00000460940 VMP1Q96GC9 406 aa10.34□□□□□ -0.75
APTX-209ENST00000460940 RBM18Q96H35 190 aaKnown RBP10.34□□□□□ -0.75
APTX-209ENST00000460940 ART5Q96L15 291 aa10.34□□□□□ -0.75
APTX-209ENST00000460940 C20orf27Q9GZN8 174 aa10.34□□□□□ -0.75
APTX-209ENST00000460940 ZNF552Q9H707 407 aaPredicted RBP10.34□□□□□ -0.75
APTX-209ENST00000460940 ZNF395Q9H8N7 513 aaPredicted RBP10.34□□□□□ -0.75
APTX-209ENST00000460940 TEKT2Q9UIF3 430 aa10.34□□□□□ -0.75
APTX-209ENST00000460940 TP53TG5Q9Y2B4 290 aa10.34□□□□□ -0.75
APTX-209ENST00000460940 DLGAP4Q9Y2H0 992 aa10.34□□□□□ -0.75
APTX-209ENST00000460940 POLR3HQ9Y535 204 aaPredicted RBP10.34□□□□□ -0.75
APTX-209ENST00000460940 AP4B1Q9Y6B7 739 aa10.34□□□□□ -0.75
APTX-209ENST00000460940 CFAP46Q8IYW2 2715 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 SLCO1B7G3V0H7 640 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 PGRMC2O15173 223 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 OR10H2O60403 315 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 OXSR1O95747 527 aaPredicted RBP10.33□□□□□ -0.76
APTX-209ENST00000460940 ITGAMP11215 1152 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 ATP6V1B1P15313 513 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 HK2P52789 917 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 RPL38P63173 70 aaKnown RBP10.33□□□□□ -0.76
APTX-209ENST00000460940 ID2Q02363 134 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 RAPSNQ13702 412 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 SMU1Q2TAY7 513 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 IGFL3Q6UXB1 125 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 ISLR2Q6UXK2 745 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 ASB18Q6ZVZ8 466 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 OR4N5Q8IXE1 308 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 SLC5A8Q8N695 610 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 ELP5Q8TE02 316 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 ZNF764Q96H86 408 aaPredicted RBP10.33□□□□□ -0.76
APTX-209ENST00000460940 BBC3Q96PG8 261 aaPredicted RBP10.33□□□□□ -0.76
APTX-209ENST00000460940 GIN1Q9NXP7 522 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 RABL2AQ9UBK7 228 aaPredicted RBP10.33□□□□□ -0.76
APTX-209ENST00000460940 CES1P1Q9UKY3 287 aa10.33□□□□□ -0.76
APTX-209ENST00000460940 A8MUA0 341 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 C17orf105B2RV13 164 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 H0YJX3 145 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 CDK2AP1O14519 115 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 KALRNO60229 2985 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 DPM1O60762 260 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 VPS4BO75351 444 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 CELA2AP08217 269 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 CPMP14384 443 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 TNNI3P19429 210 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 DDCP20711 480 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 ASMTP46597 345 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 ALDH9A1P49189 494 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 MAD2L1Q13257 205 aaPredicted RBP10.32□□□□□ -0.76
APTX-209ENST00000460940 MFAP5Q13361 173 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 SOWAHCQ53LP3 525 aaPredicted RBP10.32□□□□□ -0.76
APTX-209ENST00000460940 FAM71E1Q6IPT2 247 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 H3F3CQ6NXT2 135 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 IGFL2Q6UWQ7 119 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.32□□□□□ -0.768e-6■□□□□ 10.5
APTX-209ENST00000460940 PTPMT1Q8WUK0 201 aaPredicted RBP10.32□□□□□ -0.76
APTX-209ENST00000460940 PSMF1Q92530 271 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 FBXL20Q96IG2 436 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 LRGUKQ96M69 825 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 LMF1Q96S06 567 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 PRPF18Q99633 342 aaKnown RBP10.32□□□□□ -0.76
APTX-209ENST00000460940 GPATCH1Q9BRR8 931 aaKnown RBP10.32□□□□□ -0.76
APTX-209ENST00000460940 NUF2Q9BZD4 464 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 EPS8L2Q9H6S3 715 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 GIMAP4Q9NUV9 329 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 COPS7AQ9UBW8 275 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 UTS2RQ9UKP6 389 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 CNOT11Q9UKZ1 510 aaKnown RBP10.32□□□□□ -0.76
APTX-209ENST00000460940 ZNF780BQ9Y6R6 833 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 COL6A6A6NMZ7 2263 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 DDX5P17844 614 aaKnown RBP10.32□□□□□ -0.76
APTX-209ENST00000460940 SDC1P18827 310 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 CSNK2A2P19784 350 aaPredicted RBP10.32□□□□□ -0.76
APTX-209ENST00000460940 GPR143P51810 404 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 XKP51811 444 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 RFTN2Q52LD8 501 aaPredicted RBP10.32□□□□□ -0.76
APTX-209ENST00000460940 ZFP1Q6P2D0 407 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 SIRT6Q8N6T7 355 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 APCDD1LQ8NCL9 501 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 TSPAN14Q8NG11 270 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 OR1N1Q8NGS0 311 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 SLC2A12Q8TD20 617 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 RIT1Q92963 219 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 NCLNQ969V3 563 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 TUBGCP3Q96CW5 907 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 ZNF354BQ96LW1 612 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 C3orf30Q96M34 536 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 PHF12Q96QT6 1004 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 SEMA4CQ9C0C4 833 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 RNF32Q9H0A6 362 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 TPK1Q9H3S4 243 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 MEAF6Q9HAF1 191 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 MIEF1Q9NQG6 463 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 ZNF71Q9NQZ8 489 aaPredicted RBP10.32□□□□□ -0.76
APTX-209ENST00000460940 ASIC5Q9NY37 505 aa10.32□□□□□ -0.76
APTX-209ENST00000460940 ABI3Q9P2A4 366 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms