RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 JUNP05412 331 aaKnown RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 CNR1P21554 472 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 SSTR4P31391 388 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 GCKP35557 465 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 PLCXD2Q0VAA5 305 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 SNTA1Q13424 505 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 INPP5JQ15735 1006 aaPredicted RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 DECR1Q16698 335 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 SPDYE7PQ495Y7 208 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 FHL5Q5TD97 284 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 FAM111BQ6SJ93 734 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 ADIPOR1Q96A54 375 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 STACQ99469 402 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 NPAS2Q99743 824 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 MESP1Q9BRJ9 268 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 GPR55Q9Y2T6 319 aaPredicted RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 FAM208BQ5VWN6 2430 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 MED13Q9UHV7 2174 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 DUXAA6NLW8 204 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 E9PBE3 544 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 WWP2O00308 870 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 CFLARO15519 480 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 C1QL1O75973 258 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 NADKO95544 446 aaPredicted RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 CLPSP04118 112 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 PNLIPRP2P54317 469 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 FCRLBQ6BAA4 426 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 SLC30A6Q6NXT4 461 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 SLC35A4Q96G79 324 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 CLMPQ9H6B4 373 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 SDHAF3Q9NRP4 125 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 PLA2G3Q9NZ20 509 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 MARCOQ9UEW3 520 aaPredicted RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 FAF1Q9UNN5 650 aaPredicted RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 ABCG2Q9UNQ0 655 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 DCHS1Q96JQ0 3298 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 PRSS51A0A1B0GVH4 220 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 J3QKU1 62 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 LRATO95237 230 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 ALOX5P09917 674 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 KITP10721 976 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 SOX3P41225 446 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 NR0B1P51843 470 aaKnown RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 SQLEQ14534 574 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 ZNF791Q3KP31 576 aaPredicted RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 DGAT2L6Q6ZPD8 337 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 PAQR8Q8TEZ7 354 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 ZNF395Q9H8N7 513 aaPredicted RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 EXO1Q9UQ84 846 aaKnown RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 OR10H1Q9Y4A9 318 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 OR6C70A6NIJ9 312 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 K7EM74 188 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 MASP2O00187 686 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 KCNH1O95259 989 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 PSMG1O95456 288 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 CT62P0C5K7 136 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 IL12BP29460 328 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 MMP21Q8N119 569 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 PSD4Q8NDX1 1056 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 CLHC1Q8NHS4 586 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 SPPL2AQ8TCT8 520 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 TSPEARQ8WU66 669 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 EGLN2Q96KS0 407 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 ITPAQ9BY32 194 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 OLAHQ9NV23 265 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 BAIAP2L1Q9UHR4 511 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 VPS4AQ9UN37 437 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 GPR45Q9Y5Y3 372 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 SLC22A3O75751 556 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 EMDP50402 254 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 ALDH6A1Q02252 535 aaKnown RBP9.88□□□□□ -0.83
UBR4-208ENST00000459947 PGS1Q32NB8 556 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 SLC22A16Q86VW1 577 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 ST6GALNAC3Q8NDV1 305 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 NUP43Q8NFH3 380 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 ADCY4Q8NFM4 1077 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 HOXB13Q92826 284 aaPredicted RBP9.88□□□□□ -0.83
UBR4-208ENST00000459947 MIB2Q96AX9 1013 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 VSTM2LQ96N03 204 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 SDR39U1Q9NRG7 319 aaPredicted RBP9.88□□□□□ -0.83
UBR4-208ENST00000459947 MYOCOSA0A1B0GUC4 107 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 FAM234BA2RU67 622 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 TMEM200CA6NKL6 621 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 NEURL1O76050 574 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 GUSBP08236 651 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 UQCRC2P22695 453 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 MC3RP41968 323 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 FOXK1P85037 733 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 HSPB3Q12988 150 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 PTGR1Q14914 329 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 SHISA5Q8N114 240 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 OR7G2Q8NG99 324 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 THAP3Q8WTV1 239 aaPredicted RBP9.88□□□□□ -0.83
UBR4-208ENST00000459947 FAR1Q8WVX9 515 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 KAT2AQ92830 837 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 GFM2Q969S9 779 aaKnown RBP9.88□□□□□ -0.83
UBR4-208ENST00000459947 ZNF597Q96LX8 424 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 COL21A1Q96P44 957 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 G6PC3Q9BUM1 346 aa9.88□□□□□ -0.83
UBR4-208ENST00000459947 HOXD1Q9GZZ0 328 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms