RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 USP9XQ93008 2570 aaPredicted RBP8.38□□□□□ -1.07
VPS50-207ENST00000458530 SPTBP11277 2137 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 PIEZO2Q9H5I5 2752 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 A0A087WV62 115 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 LY6G6EA0A0G2JKS1 128 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 H0YJX3 145 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 ERVH48-1M5A8F1 160 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 PLOD2O00469 737 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 CYR61O00622 381 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 DSCR3O14972 297 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 ZNF749O43361 778 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 SUV39H1O43463 412 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 DYRK3O43781 588 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 OR10H2O60403 315 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 PRKRAO75569 313 aaKnown RBP8.38□□□□□ -1.07
VPS50-207ENST00000458530 TIPRLO75663 272 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 LDOC1O95751 146 aaPredicted RBP8.38□□□□□ -1.07
VPS50-207ENST00000458530 SLC35E2P0CK97 266 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 ACADSP16219 412 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 MATN1P21941 496 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 FBLP22087 321 aaKnown RBP8.38□□□□□ -1.07
VPS50-207ENST00000458530 PEX2P28328 305 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 MVDP53602 400 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 CRISP3P54108 245 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 HSD17B7P56937 341 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 OLR1P78380 273 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 CCL7P80098 99 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 HPCAP84074 193 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 FOLH1Q04609 750 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 TLE3Q04726 772 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 SRSF1Q07955 248 aaKnown RBP eCLIP8.38□□□□□ -1.07
VPS50-207ENST00000458530 STX4Q12846 297 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 SLC13A2Q13183 592 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 SERTAD2Q14140 314 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 TAF11Q15544 211 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 ATP6AP1Q15904 470 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 ADRM1Q16186 407 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 PRSS53Q2L4Q9 553 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.38□□□□□ -1.07
VPS50-207ENST00000458530 CMPK2Q5EBM0 449 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 COX20Q5RI15 118 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 PERM1Q5SV97 790 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 ZCCHC12Q6PEW1 402 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 DHRS13Q6UX07 377 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 TMEM107Q6UX40 140 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 IZUMO2Q6UXV1 221 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 CBLL1Q75N03 491 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 PRSS41Q7RTY9 318 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 LGI4Q8N135 537 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 ANKFN1Q8N957 763 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 TMEM102Q8N9M5 508 aaPredicted RBP8.38□□□□□ -1.07
VPS50-207ENST00000458530 NUP43Q8NFH3 380 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 OR9A2Q8NGT5 310 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 NFKBIDQ8NI38 313 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 BBS10Q8TAM1 723 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 SUN3Q8TAQ9 357 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 SNRNP27Q8WVK2 155 aaKnown RBP8.38□□□□□ -1.07
VPS50-207ENST00000458530 LRTOMTQ8WZ04 291 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 SLCO4A1Q96BD0 722 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 TBC1D20Q96BZ9 403 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 ELP4Q96EB1 424 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 CSF3RQ99062 836 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 PKP2Q99959 881 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 NUDT22Q9BRQ3 303 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 CHID1Q9BWS9 393 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 ACTRT3Q9BYD9 372 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 TRIM4Q9C037 500 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 PRTFDC1Q9NRG1 225 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 AGPAT4Q9NRZ5 378 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 FGF21Q9NSA1 209 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 EXD2Q9NVH0 621 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 AKAP7Q9P0M2 348 aaPredicted RBP8.38□□□□□ -1.07
VPS50-207ENST00000458530 NTMQ9P121 344 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 HCN3Q9P1Z3 774 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 PDP2Q9P2J9 529 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 TRPC4Q9UBN4 977 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 FTSJ1Q9UET6 329 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 NDOR1Q9UHB4 597 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 LIPT1Q9Y234 373 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 MMACHCQ9Y4U1 282 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 U3KQA8 63 aa8.38□□□□□ -1.07
VPS50-207ENST00000458530 A0A1B0GX78 115 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 TTC36A6NLP5 189 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 A8MU76 341 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 GNGT2O14610 69 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 CLOCKO15516 846 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 FOXS1O43638 330 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 SLC28A2O43868 658 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 FGF17O60258 216 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 TPST1O60507 370 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 PLOD3O60568 738 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 CTNSO60931 367 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 SERPINB7O75635 380 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 PRKD3O94806 890 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 AK1P00568 194 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 FABP3P05413 133 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 BCHEP06276 602 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 C8orf89P0DMQ9 161 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 NR2F1P10589 423 aa8.37□□□□□ -1.07
VPS50-207ENST00000458530 CDK4P11802 303 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms