RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	RNF111	Q6ZNA4	994 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	DGAT2L6	Q6ZPD8	337 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	MED12L	Q86YW9	2145 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	HIPK1	Q86Z02	1210 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	OR4N5	Q8IXE1	308 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	ACOT4	Q8N9L9	421 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	SPPL2A	Q8TCT8	520 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	TMEM171	Q8WVE6	324 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	PPWD1	Q96BP3	646 aa	Known RBP	11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	TMEM41A	Q96HV5	264 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	MARK4	Q96L34	752 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	HS3ST6	Q96QI5	342 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	EGFL8	Q99944	293 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	CAPS2	Q9BXY5	557 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	EHD1	Q9H4M9	534 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	CXorf56	Q9H5V9	222 aa		11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953	TEX10	Q9NXF1	929 aa	Predicted RBP	11.97	□□□□□ -0.49
SNHG17-208	ENST00000456953		A0A1W2PNV4	684 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953		A0A1W2PPM1	405 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	CDC7	O00311	574 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	PHF1	O43189	567 aa	Predicted RBP	11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	TLX2	O43763	284 aa	Predicted RBP	11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	SCEL	O95171	688 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	SLC35E2B	P0CK96	405 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	CCDC166	P0CW27	439 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	PYGB	P11216	843 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	ALOX15	P16050	662 aa	Predicted RBP	11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	HIST1H1T	P22492	207 aa	Predicted RBP	11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	CPN2	P22792	545 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	CHM	P24386	653 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	PTPN6	P29350	595 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	CD79B	P40259	229 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	GDF5	P43026	501 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	SLC6A12	P48065	614 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	TMED10	P49755	219 aa	Known RBP	11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	ATP5J2	P56134	94 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	SLC37A1	P57057	533 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	HERVK_113	P63132	956 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	ERVK-8	P63133	956 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	RPP38	P78345	283 aa	Known RBP	11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	SPRED3	Q2MJR0	410 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	ADNP2	Q6IQ32	1131 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	KLC3	Q6P597	504 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	ENPP6	Q6UWR7	440 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	TMEM64	Q6YI46	380 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	UBE3D	Q7Z6J8	389 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	YRDC	Q86U90	279 aa	Known RBP	11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	ST13P4	Q8IZP2	240 aa	Predicted RBP	11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	ACMSD	Q8TDX5	336 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	TP53INP1	Q96A56	240 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	PGM2	Q96G03	612 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	PIGQ	Q9BRB3	760 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	PELO	Q9BRX2	385 aa	Known RBP	11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	ERVK-6	Q9BXR3	956 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	ZNF446	Q9NWS9	450 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	GPRC5B	Q9NZH0	403 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	CLCF1	Q9UBD9	225 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	ERVK-19	Q9WJR5	959 aa		11.96	□□□□□ -0.49
SNHG17-208	ENST00000456953	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.95	□□□□□ -0.5	5e-10	■■■■□ 24.4
SNHG17-208	ENST00000456953	CRH	P06850	196 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	LTA4H	P09960	611 aa	Known RBP	11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	KRT4	P19013	534 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	UGT2B10	P36537	528 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	CASP3	P42574	277 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	MAGEA12	P43365	314 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	ATP6V0D1	P61421	351 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	SRY	Q05066	204 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	ZNF267	Q14586	743 aa	Predicted RBP	11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	FAM83E	Q2M2I3	478 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	TMEM35A	Q53FP2	167 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	TRABD2A	Q86V40	505 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	SPATA6L	Q8N4H0	392 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	MZB1	Q8WU39	189 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	KCTD4	Q8WVF5	259 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	ANKRD49	Q8WVL7	239 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	TANK	Q92844	425 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	FAM111A	Q96PZ2	611 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	G6PC3	Q9BUM1	346 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	RPF2	Q9H7B2	306 aa	Known RBP	11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	NMRAL1	Q9HBL8	299 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	TMBIM4	Q9HC24	238 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	MS4A12	Q9NXJ0	267 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	OARD1	Q9Y530	152 aa		11.95	□□□□□ -0.5
SNHG17-208	ENST00000456953	HEATR5A	Q86XA9	2040 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	C2orf92	A0A1B0GVN3	265 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	NPEPPSL1	A6NEC2	478 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	RNF223	E7ERA6	249 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	RTCA	O00442	366 aa	Known RBP	11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	GNB5	O14775	395 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	OR10H2	O60403	315 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	SASH3	O75995	380 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	COL6A2	P12110	1019 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	LOX	P28300	417 aa	Predicted RBP	11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	CCKAR	P32238	428 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	IRF9	Q00978	393 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	PCDH1	Q08174	1060 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	TSNAXIP1	Q2TAA8	658 aa		11.94	□□□□□ -0.5
SNHG17-208	ENST00000456953	AP5B1	Q2VPB7	878 aa		11.94	□□□□□ -0.5

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