RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 HNRNPA0Q13151 305 aaKnown RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 SGCGQ13326 291 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 SPHARQ15513 63 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 TMEM184AQ6ZMB5 413 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 AMER3Q8N944 861 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 NLGN4YQ8NFZ3 816 aaPredicted RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 TMEM19Q96HH6 336 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 DCLRE1CQ96SD1 692 aaKnown RBP11.72□□□□□ -0.53
LINC00959-201ENST00000456581 GPA33Q99795 319 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 TM9SF2Q99805 663 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 SLC17A9Q9BYT1 436 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 MIXL1Q9H2W2 232 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 THSD1Q9NS62 852 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 MKLN1Q9UL63 735 aa11.72□□□□□ -0.53
LINC00959-201ENST00000456581 TRBV23OR9-2A0A075B6M9 112 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 A0A0G2JMP0 313 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 MEN1O00255 615 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 DPM1O60762 260 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 SERPIND1P05546 499 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 CEACAM5P06731 702 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 LTBRP36941 435 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 PCBP3P57721 371 aaKnown RBP11.71□□□□□ -0.53
LINC00959-201ENST00000456581 RAB25P57735 213 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF91Q05481 1191 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 TARDBPQ13148 414 aaKnown RBP eCLIP11.71□□□□□ -0.53
LINC00959-201ENST00000456581 ZNF776Q68DI1 518 aaPredicted RBP11.71□□□□□ -0.53
LINC00959-201ENST00000456581 TCTN3Q6NUS6 607 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 C19orf48Q6RUI8 117 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 UNC5DQ6UXZ4 953 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 B3GLCTQ6Y288 498 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 RD3Q7Z3Z2 195 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 CAMKMTQ7Z624 323 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 ADCK2Q7Z695 626 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 ADGRF3Q8IZF5 1079 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 FRMD1Q8N878 549 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 UBASH3BQ8TF42 649 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 WDR34Q96EX3 536 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 PHOX2BQ99453 314 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 YIPF4Q9BSR8 244 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 TSSK6Q9BXA6 273 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 BHLHE41Q9C0J9 482 aaPredicted RBP11.71□□□□□ -0.53
LINC00959-201ENST00000456581 C11orf54Q9H0W9 315 aaPredicted RBP11.71□□□□□ -0.53
LINC00959-201ENST00000456581 KCNK12Q9HB15 430 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 MIEF1Q9NQG6 463 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 CORO2BQ9UQ03 480 aa11.71□□□□□ -0.53
LINC00959-201ENST00000456581 PLPP1O14494 284 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 RNGTTO60942 597 aaKnown RBP11.71□□□□□ -0.54
LINC00959-201ENST00000456581 ADH1BP00325 375 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 ELAVL4P26378 380 aaKnown RBP11.71□□□□□ -0.54
LINC00959-201ENST00000456581 CTHP32929 405 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 ETV5P41161 510 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 ETV1P50549 477 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 ADPRHP54922 357 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 DSTNP60981 165 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 OLR1P78380 273 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 ZFP69Q49AA0 526 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 TRIM40Q6P9F5 258 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 TMPRSS11AQ6ZMR5 421 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 C17orf64Q86WR6 236 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 FAM46DQ8NEK8 389 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 SLC7A13Q8TCU3 470 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 QRSL1Q9H0R6 528 aaKnown RBP11.71□□□□□ -0.54
LINC00959-201ENST00000456581 FGF22Q9HCT0 170 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 ATP6V1HQ9UI12 483 aa11.71□□□□□ -0.54
LINC00959-201ENST00000456581 CAPN5O15484 640 aaPredicted RBP11.7□□□□□ -0.54
LINC00959-201ENST00000456581 NCR1O76036 304 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 EML2O95834 649 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 SCG5P05408 212 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 HOXB2P14652 356 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 PPIBP23284 216 aaKnown RBP11.7□□□□□ -0.54
LINC00959-201ENST00000456581 NTSR1P30989 418 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 C21orf58P58505 322 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 MAP4K2Q12851 820 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 HYAL2Q12891 473 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 SYPL1Q16563 259 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 CRB2Q5IJ48 1285 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 FAM71E1Q6IPT2 247 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 FAM131AQ6UXB0 335 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 ZNF438Q7Z4V0 828 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 OXR1Q8N573 874 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 POP5Q969H6 163 aaKnown RBP11.7□□□□□ -0.54
LINC00959-201ENST00000456581 EXOSC8Q96B26 276 aaKnown RBP11.7□□□□□ -0.54
LINC00959-201ENST00000456581 CRELD1Q96HD1 420 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 SLC25A19Q9HC21 320 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 IGKV1-8A0A0C4DH67 115 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 PRAMEF27A3QJZ7 478 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 GLOD5A6NK44 160 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 FOXE1O00358 373 aaPredicted RBP11.7□□□□□ -0.54
LINC00959-201ENST00000456581 RGS13O14921 159 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 MSL3P1P0C860 447 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 ARAFP10398 606 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 ITGA2P17301 1181 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 XKP51811 444 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 GPLD1P80108 840 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 FAM209AQ5JX71 171 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 ASCC1Q8N9N2 400 aaKnown RBP11.7□□□□□ -0.54
LINC00959-201ENST00000456581 CCL4L1Q8NHW4 92 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 RNF170Q96K19 258 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 DEPDC7Q96QD5 511 aa11.7□□□□□ -0.54
LINC00959-201ENST00000456581 C1QTNF2Q9BXJ5 285 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms