RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 TMCO1Q9UM00 188 aa7.32□□□□□ -1.24
NIF3L1-209ENST00000454952 ACOT9Q9Y305 439 aa7.32□□□□□ -1.24
NIF3L1-209ENST00000454952 SLC6A5Q9Y345 797 aa7.32□□□□□ -1.24
NIF3L1-209ENST00000454952 SAR1BQ9Y6B6 198 aa7.32□□□□□ -1.24
NIF3L1-209ENST00000454952 CXorf49A8MYA2 514 aaPredicted RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 TP73O15350 636 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 TMPRSS11DO60235 418 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 SMPD2O60906 423 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 EEDO75530 441 aaKnown RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 CLDN9O95484 217 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 CLPSP04118 112 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 CRHP06850 196 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 ABCB1P08183 1280 aaPredicted RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 CPMP14384 443 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 PORP16435 677 aaPredicted RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 CD53P19397 219 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 FPR1P21462 350 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 NT5EP21589 574 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 DEKP35659 375 aaKnown RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 ARL1P40616 181 aaPredicted RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 XKP51811 444 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 NAGLUP54802 743 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 WNT3P56703 355 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 PRR20EP86478 221 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 PRR20CP86479 221 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 PRR20DP86480 221 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 PRR20BP86481 221 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 PRR20AP86496 221 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 CAV1Q03135 178 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 GTF2H2Q13888 395 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 FGFBP1Q14512 234 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 ACAP2Q15057 778 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 CPSF6Q16630 551 aaKnown RBP eCLIP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 PFKFB4Q16877 469 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 KBTBD12Q3ZCT8 623 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 EIPR1Q53HC9 387 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 WIPI1Q5MNZ9 446 aaPredicted RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 FNDC7Q5VTL7 733 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 OR2A2Q6IF42 318 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 GTF2H2CQ6P1K8 395 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 PRSS57Q6UWY2 283 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 CHMP1BQ7LBR1 199 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 IFNEQ86WN2 208 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 CREG2Q8IUH2 290 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 VWA5B2Q8N398 1253 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 ZNF615Q8N8J6 731 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 L3MBTL4Q8NA19 623 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 C9orf106Q8NAJ2 232 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 FAM83FQ8NEG4 500 aaPredicted RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 OR14L1PQ8NHC6 308 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 LINC01560Q8TB33 94 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 TMCO6Q96DC7 493 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 ITPKCQ96DU7 683 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 LRRC1Q9BTT6 524 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 BDH2Q9BUT1 245 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 OSBPL11Q9BXB4 747 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 ZNF717Q9BY31 904 aaPredicted RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 OR2B2Q9GZK3 357 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 ZNF395Q9H8N7 513 aaPredicted RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 IPPKQ9H8X2 491 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 NMRK1Q9NWW6 199 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 GALNT8Q9NY28 637 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 ZNF226Q9NYT6 803 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 KLRF1Q9NZS2 232 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 PRODH2Q9UF12 536 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 EXO1Q9UQ84 846 aaKnown RBP7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 SNX24Q9Y343 169 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 KIAA1549Q9HCM3 1950 aa7.31□□□□□ -1.24
NIF3L1-209ENST00000454952 C1orf226A1L170 272 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 PRAMEF25A6NGN4 478 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 GNB5O14775 395 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 MSTNO14793 375 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 PRKRAO75569 313 aaKnown RBP7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 PIAS1O75925 651 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 BCAS2O75934 225 aaPredicted RBP7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 ATP1B1P05026 303 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 CSNK2A2P19784 350 aaPredicted RBP7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 DRD5P21918 477 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 GPX3P22352 226 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 SERPINB4P48594 390 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 AGFG1P52594 562 aaKnown RBP7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 MAPK12P53778 367 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 EEFSECP57772 596 aaKnown RBP7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 GNG11P61952 73 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 MRPS22P82650 360 aaKnown RBP7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 PLCXD2Q0VAA5 305 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 MAP4K2Q12851 820 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 IFT88Q13099 833 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 CCNYL2Q5T2Q4 361 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 FRG2Q64ET8 278 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 BICRALQ6AI39 1079 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 TTC19Q6DKK2 380 aaPredicted RBP7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 TMEM64Q6YI46 380 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 CMC1Q7Z7K0 106 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 YRDCQ86U90 279 aaKnown RBP7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 GRAMD2AQ8IUY3 354 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 PPM1NQ8N819 430 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 SIMC1Q8NDZ2 872 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 WDR20Q8TBZ3 569 aa7.3□□□□□ -1.24
NIF3L1-209ENST00000454952 TRPC4APQ8TEL6 797 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms