RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 CCDC3Q9BQI4 270 aa8.3□□□□□ -1.08
RPE-216ENST00000454822 RHNO1Q9BSD3 238 aa8.3□□□□□ -1.08
RPE-216ENST00000454822 QRSL1Q9H0R6 528 aaKnown RBP8.3□□□□□ -1.08
RPE-216ENST00000454822 SLC38A1Q9H2H9 487 aa8.3□□□□□ -1.08
RPE-216ENST00000454822 IL21RQ9HBE5 538 aa8.3□□□□□ -1.08
RPE-216ENST00000454822 DNAAF2Q9NVR5 837 aaKnown RBP8.3□□□□□ -1.08
RPE-216ENST00000454822 A4GNTQ9UNA3 340 aa8.3□□□□□ -1.08
RPE-216ENST00000454822 PCDHGB1Q9Y5G3 927 aa8.3□□□□□ -1.08
RPE-216ENST00000454822 PCDHGA10Q9Y5H3 936 aa8.3□□□□□ -1.08
RPE-216ENST00000454822 TRIOO75962 3097 aa8.3□□□□□ -1.08
RPE-216ENST00000454822 DNAH14Q0VDD8 3507 aa8.3□□□□□ -1.08
RPE-216ENST00000454822 DUXAA6NLW8 204 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 H3BMQ9 156 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 FAAHO00519 579 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 SOX1O00570 391 aaPredicted RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 INMTO95050 263 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 CTSBP07858 339 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 NME1P15531 152 aaKnown RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 CDH3P22223 829 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 ELAVL4P26378 380 aaKnown RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 KRT20P35900 424 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 CSNK2BP67870 215 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 MFSD12Q6NUT3 480 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 CDC73Q6P1J9 531 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 EGFL6Q8IUX8 553 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 MCATQ8IVS2 390 aaKnown RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 CA13Q8N1Q1 262 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 OR2L13Q8N349 312 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 SLC16A11Q8NCK7 471 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 TMEM52Q8NDY8 209 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 SIMC1Q8NDZ2 872 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 CADM4Q8NFZ8 388 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 OR6T1Q8NGN1 323 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 FAM81AQ8TBF8 368 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 DOK4Q8TEW6 326 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 COG8Q96MW5 612 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 MS4A4EQ96PG1 132 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 FUZQ9BT04 418 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 PINK1Q9BXM7 581 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 ZNF226Q9NYT6 803 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 CALML5Q9NZT1 146 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 WNT16Q9UBV4 365 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 FBXL21Q9UKT6 434 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 SLC9A8Q9Y2E8 581 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 SPACA6W5XKT8 324 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 SLC9B1P1A6NJY1 282 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 ZNF99A8MXY4 864 aaPredicted RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 SGK494L7N484 410 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 CASC3O15234 703 aaKnown RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 RGS10O43665 173 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 FGF17O60258 216 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 OR10H3O60404 316 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 FCMRO60667 390 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 LDB3O75112 727 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 UBXN7O94888 489 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 OXSR1O95747 527 aaPredicted RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 GPR75O95800 540 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 ADAP00813 363 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 ALPPP05187 535 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 MAP2K4P45985 399 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 IDH2P48735 452 aaKnown RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 CRISP1P54107 249 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 TMBIM6P55061 237 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 RACK1P63244 317 aaKnown RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 SHC2P98077 582 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 DYNC1I2Q13409 638 aaKnown RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 PTGES3Q15185 160 aaKnown RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 DEFB110Q30KQ9 67 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 FAM214AQ32MH5 1076 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 TRMT12Q53H54 448 aaKnown RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 ZNF628Q5EBL2 1059 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 ZNF311Q5JNZ3 666 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 HEPHL1Q6MZM0 1159 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 C16orf62Q7Z3J2 963 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 IQCHQ86VS3 1027 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 GKN2Q86XP6 184 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 VRK2Q86Y07 508 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 P3H2Q8IVL5 708 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 NLGN4XQ8N0W4 816 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 DEPDC4Q8N2C3 294 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 C19orf47Q8N9M1 422 aaKnown RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 FAR1Q8WVX9 515 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 IPCEF1Q8WWN9 437 aaPredicted RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 SHDQ96IW2 340 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 NELL2Q99435 816 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 FNDC11Q9BVV2 318 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 DGCR6LQ9BY27 220 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 UCK2Q9BZX2 261 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 MIR1-1HGQ9H1L0 117 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 PCED1AQ9H1Q7 454 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 TMEM9Q9P0T7 183 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 PTGFRNQ9P2B2 879 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 FTSJ1Q9UET6 329 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 ENOPH1Q9UHY7 261 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 DOLKQ9UPQ8 538 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 MGAT4BQ9UQ53 548 aa8.29□□□□□ -1.08
RPE-216ENST00000454822 HEMK1Q9Y5R4 338 aaPredicted RBP8.29□□□□□ -1.08
RPE-216ENST00000454822 A0A1W2PRQ8 180 aa8.28□□□□□ -1.08
RPE-216ENST00000454822 SH3PXD2BA1X283 911 aa8.28□□□□□ -1.08
RPE-216ENST00000454822 TRIM64BA6NI03 449 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms