RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 PMEPA1Q969W9 287 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 TAMM41Q96BW9 452 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 OTUB1Q96FW1 271 aaPredicted RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 TMEM19Q96HH6 336 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 PTCHD1Q96NR3 888 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 DGAT2Q96PD7 388 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 MS4A4EQ96PG1 132 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 SEPHS2Q99611 448 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 CTRCQ99895 268 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 YIPF2Q9BWQ6 316 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 CHID1Q9BWS9 393 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 UGT2B28Q9BY64 529 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ACTRT3Q9BYD9 372 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 IRF2BPLQ9H1B7 796 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 MAGIXQ9H6Y5 334 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 RUBCNLQ9H714 662 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 AKIRIN1Q9H9L7 192 aaPredicted RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 BCL2L10Q9HD36 194 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 MKKSQ9NPJ1 570 aaPredicted RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 DDX18Q9NVP1 670 aaKnown RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 THUMPD1Q9NXG2 353 aaKnown RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 C6orf203Q9P0P8 240 aaPredicted RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 STOML1Q9UBI4 398 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 CTSFQ9UBX1 484 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 AURKCQ9UQB9 309 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 PCDHGA1Q9Y5H4 931 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 V9GYQ6 96 aa5.6□□□□□ -1.51
SDC4P-201ENST00000453285 PTPRZ1P23471 2315 aaPredicted RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 ZFHX2Q9C0A1 2572 aaPredicted RBP5.6□□□□□ -1.51
SDC4P-201ENST00000453285 GVINP1Q7Z2Y8 2422 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 CEP250Q9BV73 2442 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 DSPPQ9NZW4 1301 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 PMS2P1A4D2B8 440 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 PRAMEF25A6NGN4 478 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 PROB1E7EW31 1015 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 MEN1O00255 615 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 OR10H2O60403 315 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 PRSS23O95084 383 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 NKX2-2O95096 273 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 MFN2O95140 757 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 ZIC2O95409 532 aaPredicted RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 MT-CO3P00414 261 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 MT-ND1P03886 318 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 OPN1SWP03999 348 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 BCHEP06276 602 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 CHRM4P08173 479 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 ZGLP1P0C6A0 271 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 RAP2AP10114 183 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 ITIH1P19827 911 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 CD247P20963 164 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 PSMA4P25789 261 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 AQP1P29972 269 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 SSTR4P31391 388 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 VHLP40337 213 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 MAGEA2P43356 314 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 EMDP50402 254 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 ANXA11P50995 505 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 MAPK10P53779 464 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 SESN3P58005 492 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 FOXL2P58012 376 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 KCNJ10P78508 379 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 DCDP81605 110 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 CHRNB3Q05901 458 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 ZNF267Q14586 743 aaPredicted RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 TRIP6Q15654 476 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 DUSP5Q16690 384 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 FAM98BQ52LJ0 330 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 LRRC23Q53EV4 343 aaPredicted RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 RPS26P11Q5JNZ5 115 aaPredicted RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 INTS11Q5TA45 600 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 OGFRL1Q5TC84 451 aaPredicted RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 PRAMEF8Q5VWM4 474 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 PRAMEF7Q5VXH5 474 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 MRPL14Q6P1L8 145 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 ZNF517Q6ZMY9 492 aaPredicted RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 SZRD1Q7Z422 152 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 VTCN1Q7Z7D3 282 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 PATL1Q86TB9 770 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 SLC44A2Q8IWA5 706 aaPredicted RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 GALNT12Q8IXK2 581 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 KBTBD2Q8IY47 623 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 VWA5B2Q8N398 1253 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 ZNF615Q8N8J6 731 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 ZSCAN1Q8NBB4 408 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 CHDHQ8NE62 594 aaPredicted RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 GPR32P1Q8NGA4 272 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 OR52R1Q8NGF1 315 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 STT3BQ8TCJ2 826 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 ADAMTS15Q8TE58 950 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 APOBEC4Q8WW27 367 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 CDS1Q92903 461 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 RIT1Q92963 219 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 POP5Q969H6 163 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 CLIP3Q96DZ5 547 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 SLC47A1Q96FL8 570 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 LIN37Q96GY3 246 aaPredicted RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 RBM18Q96H35 190 aaKnown RBP5.59□□□□□ -1.51
SDC4P-201ENST00000453285 C7orf34Q96L11 122 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 RNF145Q96MT1 663 aa5.59□□□□□ -1.51
SDC4P-201ENST00000453285 LRFN5Q96NI6 719 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms