RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 SERHLQ9NQF3 203 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 SNX15Q9NRS6 342 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 INTS10Q9NVR2 710 aaKnown RBP11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 ARL15Q9NXU5 204 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 BFARQ9NZS9 450 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 DYRK1BQ9Y463 629 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 MAD1L1Q9Y6D9 718 aa11.31□□□□□ -0.6
AC004540.1-204ENST00000449537 A0A0A6YYJ9 748 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 TMEM89A2RUT3 159 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 SLCO1B7G3V0H7 640 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 CERS1P27544 350 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 NPY2RP49146 381 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 BIKQ13323 160 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 SP140Q13342 867 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 CR1LQ2VPA4 569 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 NCMAPQ5T1S8 102 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 NEPROQ6NW34 567 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 WDR93Q6P2C0 686 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 TRIM40Q6P9F5 258 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 RNF111Q6ZNA4 994 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 GPSM1Q86YR5 675 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 OR4N5Q8IXE1 308 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 BANPQ8N9N5 519 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 OR2L5Q8NG80 312 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 CD200R1Q8TD46 325 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 DOK4Q8TEW6 326 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 EEF1AKMT1Q8WVE0 214 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 FIG4Q92562 907 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 SERPINB12Q96P63 405 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 OCEL1Q9H607 264 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 METTL7AQ9H8H3 244 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 COPS7BQ9H9Q2 264 aaPredicted RBP11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 FAIMQ9NVQ4 179 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 TAS2R10Q9NYW0 307 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 GRHL1Q9NZI5 618 aa11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 EXO1Q9UQ84 846 aaKnown RBP11.3□□□□□ -0.6
AC004540.1-204ENST00000449537 C2orf92A0A1B0GVN3 265 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 MAGEB16A2A368 324 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 CCDC151A5D8V7 595 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 C2orf72A6NCS6 295 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 PABPN1LA6NDY0 278 aaKnown RBP11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 OR6C76A6NM76 312 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 H2AFYO75367 372 aaKnown RBP11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 VENTXO95231 258 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 TTC4O95801 387 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 TGFAP01135 160 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 HPDP32754 393 aaPredicted RBP11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 SRP14P37108 136 aaKnown RBP11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 DHX9Q08211 1270 aaKnown RBP11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 ZNF267Q14586 743 aaPredicted RBP11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 EBPQ15125 230 aaKnown RBP11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 RAB35Q15286 201 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 BCL2A1Q16548 175 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 UGT3A1Q6NUS8 523 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 SLC30A6Q6NXT4 461 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 ZNF549Q6P9A3 640 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 DGAT2L6Q6ZPD8 337 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 TMPRSS11BQ86T26 416 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 DTX2Q86UW9 622 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 RELL1Q8IUW5 271 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 ZNF525Q8N782 197 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 TTLQ8NG68 377 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 C10orf105Q8TEF2 133 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 ANKRD7Q92527 254 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 SFXN2Q96NB2 322 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 FMO2Q99518 471 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 KIFC1Q9BW19 673 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 TRIM54Q9BYV2 358 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 TRIM31Q9BZY9 425 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 REXO4Q9GZR2 422 aaKnown RBP11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 DPH5Q9H2P9 285 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 LYRM4Q9HD34 91 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 NGBQ9NPG2 151 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 PLSCR4Q9NRQ2 329 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 CISD1Q9NZ45 108 aaKnown RBP11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 ARMCX1Q9P291 453 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 DMGDHQ9UI17 866 aaKnown RBP11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 GPR52Q9Y2T5 361 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 SNX24Q9Y343 169 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 SPACA6W5XKT8 324 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 NBEAL2Q6ZNJ1 2754 aa11.29□□□□□ -0.6
AC004540.1-204ENST00000449537 E7ESA3 106 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 ICOSLGO75144 302 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 CCDC166P0CW27 439 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 RGS4P49798 205 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 NRG3P56975 720 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 SLC37A1P57057 533 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 HERVK_113P63132 956 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 ERVK-8P63133 956 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 IRX1P78414 480 aaPredicted RBP11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 IGLV3-21P80748 117 aaPredicted RBP11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 PLIN5Q00G26 463 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 SLC7A5Q01650 507 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 SLMAPQ14BN4 828 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 AGAP6Q5VW22 663 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 HLA-DQA1Q5Y7H0 255 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 TMIGD1Q6UXZ0 262 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 PRUNE1Q86TP1 453 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 KAT2AQ92830 837 aa11.28□□□□□ -0.6
AC004540.1-204ENST00000449537 FBXL8Q96CD0 374 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms