RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 IL20RAQ9UHF4 553 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 PCDHGB2Q9Y5G2 931 aa12.18□□□□□ -0.46
SHC1-210ENST00000448116 PRR23AA6NEV1 266 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 RB1P06400 928 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 TAS2R41P59536 307 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 CD83Q01151 205 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 NDUFAF5Q5TEU4 345 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 FAM46CQ5VWP2 391 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 PDZD3Q86UT5 571 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 GALNT12Q8IXK2 581 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 CXorf40AQ8TE69 158 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 KLK6Q92876 244 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 C16orf58Q96GQ5 468 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 TBC1D17Q9HA65 648 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 TRAPPC4Q9Y296 219 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 OBSL1O75147 1896 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 CASKO14936 926 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 ITGB8P26012 769 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 CCDC85BQ15834 202 aaPredicted RBP12.17□□□□□ -0.46
SHC1-210ENST00000448116 NDUFA5Q16718 116 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 TMEM201Q5SNT2 666 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 TEX47Q8TBZ9 253 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 RASSF5Q8WWW0 418 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 PMEPA1Q969W9 287 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 LGR4Q9BXB1 951 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 C11orf54Q9H0W9 315 aaPredicted RBP12.17□□□□□ -0.46
SHC1-210ENST00000448116 PLSCR3Q9NRY6 295 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 PAQR5Q9NXK6 330 aaPredicted RBP12.17□□□□□ -0.46
SHC1-210ENST00000448116 SNX7Q9UNH6 387 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 CPSF4LA6NMK7 179 aaKnown RBP12.17□□□□□ -0.46
SHC1-210ENST00000448116 FGBP02675 491 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 CD79BP40259 229 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 PCBP4P57723 403 aaKnown RBP12.17□□□□□ -0.46
SHC1-210ENST00000448116 KRT33BQ14525 404 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 DDI2Q5TDH0 399 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 TM9SF4Q92544 642 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 SLC25A46Q96AG3 418 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 FYTTD1Q96QD9 318 aaKnown RBP12.17□□□□□ -0.46
SHC1-210ENST00000448116 TMEM246Q9BRR3 403 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 OR2B2Q9GZK3 357 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 SLC22A4Q9H015 551 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 MIXL1Q9H2W2 232 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 LHX9Q9NQ69 397 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 IMP3Q9NV31 184 aaKnown RBP12.17□□□□□ -0.46
SHC1-210ENST00000448116 GRIP1Q9Y3R0 1128 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 IRAK3Q9Y616 596 aa12.17□□□□□ -0.46
SHC1-210ENST00000448116 SLC30A4O14863 429 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 PCDH8O95206 1070 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 TP53P04637 393 aaPredicted RBP12.16□□□□□ -0.46
SHC1-210ENST00000448116 EPCAMP16422 314 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 SMSP52788 366 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 UBE3AQ05086 875 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 OCLNQ16625 522 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 FAM26EQ8N5C1 309 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 ATP6V1C2Q8NEY4 427 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 OR8K5Q8NH50 307 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 OR52P1PQ8NH57 321 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 SETD6Q8TBK2 473 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 ENKURQ8TC29 256 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 CREB3L4Q8TEY5 395 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 ST6GAL2Q96JF0 529 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 TMED9Q9BVK6 235 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 HDHD5Q9BXW7 423 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 POLDIP3Q9BY77 421 aaKnown RBP12.16□□□□□ -0.46
SHC1-210ENST00000448116 SAP130Q9H0E3 1048 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 KLHL31Q9H511 634 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 RANGRFQ9HD47 186 aaPredicted RBP12.16□□□□□ -0.46
SHC1-210ENST00000448116 DIMT1Q9UNQ2 313 aaKnown RBP12.16□□□□□ -0.46
SHC1-210ENST00000448116 MRPS23Q9Y3D9 190 aaKnown RBP12.16□□□□□ -0.46
SHC1-210ENST00000448116 ALPK3Q96L96 1907 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 C17orf113A0A1B0GUU1 675 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 CDK2AP1O14519 115 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 HMGN2P05204 90 aaKnown RBP12.16□□□□□ -0.46
SHC1-210ENST00000448116 CHRM4P08173 479 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 SLC35G4P0C7Q5 338 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 CEBPBP17676 345 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 APEX1P27695 318 aaKnown RBP12.16□□□□□ -0.46
SHC1-210ENST00000448116 CENPAP49450 140 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 WNT4P56705 351 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 FLYWCH1Q4VC44 716 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 C9orf64Q5T6V5 341 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 KIAA1161Q6NSJ0 714 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 ARMC5Q96C12 935 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 AMDHD1Q96NU7 426 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 KCNE3Q9Y6H6 103 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 A0A1W2PS29 197 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 SYNDIG1LA6NDD5 238 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 FAM170BA6NMN3 283 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 PGRMC2O15173 223 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 FKTNO75072 461 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 NCR1O76036 304 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 CSF3P09919 207 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 NTSP30990 170 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 SOX18P35713 384 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 AVPR1BP47901 424 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 SLC9A3P48764 834 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 DBPQ10586 325 aaPredicted RBP12.16□□□□□ -0.46
SHC1-210ENST00000448116 KLHL22Q53GT1 634 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 OR4C11Q6IEV9 310 aa12.16□□□□□ -0.46
SHC1-210ENST00000448116 ZNF730Q6ZMV8 503 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms