RNA–Protein interactions for RNA: ENST00000447906.6

OTUD4-201, Transcript of OTU deubiquitinase 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene OTUD4, Length 3,829 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD4-201ENST00000447906 HIST1H2ACQ93077 130 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 LYSMD1Q96S90 227 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 INSM2Q96T92 566 aaPredicted RBP13.18□□□□□ -0.3
OTUD4-201ENST00000447906 CD180Q99467 661 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 MYNNQ9NPC7 610 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 STARD5Q9NSY2 213 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 SH2B3Q9UQQ2 575 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 ADAP00813 363 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 HNRNPA1P09651 372 aaKnown RBP eCLIP13.18□□□□□ -0.3
OTUD4-201ENST00000447906 PVRP15151 417 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 GSTM3P21266 225 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 CD40LGP29965 261 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 GABRA3P34903 492 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
OTUD4-201ENST00000447906 GPR19Q15760 415 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 ITPRIPL2Q3MIP1 535 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 NEIL3Q8TAT5 605 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 CHFRQ96EP1 664 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 HRASLS5Q96KN8 279 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 RAB11FIP5Q9BXF6 653 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 IL21RQ9HBE5 538 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 MRPL39Q9NYK5 338 aaKnown RBP13.18□□□□□ -0.3
OTUD4-201ENST00000447906 TMEFF2Q9UIK5 374 aaPredicted RBP13.18□□□□□ -0.3
OTUD4-201ENST00000447906 RWDD3Q9Y3V2 267 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 PLPP1O14494 284 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 KLF8O95600 359 aaPredicted RBP13.18□□□□□ -0.3
OTUD4-201ENST00000447906 IFNGP01579 166 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 ARAFP10398 606 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 CAPZA2P47755 286 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 MTNR1AP48039 350 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 ZNF45Q02386 682 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 C18orf63Q68DL7 685 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 TANGO2Q6ICL3 276 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 CHMP1BQ7LBR1 199 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 VRK2Q86Y07 508 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 LGR4Q9BXB1 951 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 EGLN3Q9H6Z9 239 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 SMURF1Q9HCE7 757 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 MRPS33Q9Y291 106 aaKnown RBP13.18□□□□□ -0.3
OTUD4-201ENST00000447906 LOC285556D6RIA3 1793 aa13.18□□□□□ -0.3
OTUD4-201ENST00000447906 A0A1W2PQL4 384 aaPredicted RBP13.17□□□□□ -0.3
OTUD4-201ENST00000447906 UPK1AO00322 258 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 PLD2O14939 933 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 AKAP8O43823 692 aaKnown RBP13.17□□□□□ -0.3
OTUD4-201ENST00000447906 LDB3O75112 727 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 RAB36O95755 333 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 GNSP15586 552 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 CXCR4P61073 352 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 SF3B4Q15427 424 aaKnown RBP eCLIP13.17□□□□□ -0.33e-6■■■■■ 30.2
OTUD4-201ENST00000447906 TBRG1Q3YBR2 411 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 ZNF544Q6NX49 715 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 C8orf82Q6P1X6 216 aaPredicted RBP13.17□□□□□ -0.3
OTUD4-201ENST00000447906 TUBA3EQ6PEY2 450 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 OR52E4Q8NGH9 312 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 OR52E1Q8NGJ3 308 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 TMEM246Q9BRR3 403 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 SPATA9Q9BWV2 254 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 RFXAPO00287 272 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 ADAM23O75077 832 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 AHCYP23526 432 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 RPS21P63220 83 aaKnown RBP13.17□□□□□ -0.3
OTUD4-201ENST00000447906 KCNJ10P78508 379 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 E2F2Q14209 437 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 UNC5DQ6UXZ4 953 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 TIGD4Q8IY51 512 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 RHOXF1Q8NHV9 184 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 SPATA6Q9NWH7 488 aaPredicted RBP13.17□□□□□ -0.3
OTUD4-201ENST00000447906 WDR81Q562E7 1941 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 PRSS23O95084 383 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 S100A1P23297 94 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 CHRNEQ04844 493 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 GRSF1Q12849 480 aaKnown RBP eCLIP13.17□□□□□ -0.3
OTUD4-201ENST00000447906 AMZ1Q400G9 498 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 PLBD1Q6P4A8 553 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 OR8H1Q8NGG4 311 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 SPPL3Q8TCT6 385 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 OR2M4Q96R27 311 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 NELL2Q99435 816 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 PSORS1C1Q9UIG5 152 aa13.17□□□□□ -0.3
OTUD4-201ENST00000447906 SBF1O95248 1867 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 BLOC1S5-TXNDC5H3BN57 136 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 ARHGAP33O14559 1287 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 EMC8O43402 210 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 HMGN1P05114 100 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 GIPRP48546 466 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 CSRP3P50461 194 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 SLC36A4Q6YBV0 504 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 NATD1Q8N6N6 113 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 LRRC17Q8N6Y2 441 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 WDR20Q8TBZ3 569 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 RAB7BQ96AH8 199 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 SLC22A18Q96BI1 424 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 CSF3RQ99062 836 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 BTBD1Q9H0C5 482 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 TP63Q9H3D4 680 aaPredicted RBP13.16□□□□□ -0.3
OTUD4-201ENST00000447906 DICER1Q9UPY3 1922 aaKnown RBP13.16□□□□□ -0.3
OTUD4-201ENST00000447906 IQCMA0A1B0GVH7 501 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 A0A1B0GVT2 93 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 IRGMA1A4Y4 181 aa13.16□□□□□ -0.3
OTUD4-201ENST00000447906 C1orf226A1L170 272 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms