RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 CPMP14384 443 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 CD46P15529 392 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 PORP16435 677 aaPredicted RBP11.49□□□□□ -0.57
SSR4-205ENST00000447375 CSNK2A2P19784 350 aaPredicted RBP11.49□□□□□ -0.57
SSR4-205ENST00000447375 ABCE1P61221 599 aaKnown RBP11.49□□□□□ -0.57
SSR4-205ENST00000447375 RNF4P78317 190 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 ZNF763Q0D2J5 394 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 HEPACAMQ14CZ8 416 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 HHATQ5VTY9 493 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.49□□□□□ -0.57
SSR4-205ENST00000447375 CCDC71Q8IV32 467 aaPredicted RBP11.49□□□□□ -0.57
SSR4-205ENST00000447375 ZZZ3Q8IYH5 903 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 FAM98AQ8NCA5 519 aaKnown RBP11.49□□□□□ -0.57
SSR4-205ENST00000447375 MDS2Q8NDY4 140 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 FAM57AQ8TBR7 257 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 TWIST2Q8WVJ9 160 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 ARL8AQ96BM9 186 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 SCMH1Q96GD3 660 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 ART5Q96L15 291 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 FCRL1Q96LA6 429 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 ZNF681Q96N22 645 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 CCT7Q99832 543 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 EBPLQ9BY08 206 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 C20orf27Q9GZN8 174 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 ZNF395Q9H8N7 513 aaPredicted RBP11.49□□□□□ -0.57
SSR4-205ENST00000447375 VIPAS39Q9H9C1 493 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 LRTM1Q9HBL6 345 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 EHD3Q9NZN3 535 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 MYOTQ9UBF9 498 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.49□□□□□ -0.57
SSR4-205ENST00000447375 FIS1Q9Y3D6 152 aa11.49□□□□□ -0.57
SSR4-205ENST00000447375 INTS1Q8N201 2190 aaKnown RBP11.49□□□□□ -0.57
SSR4-205ENST00000447375 FN1P02751 2386 aaKnown RBP11.49□□□□□ -0.57
SSR4-205ENST00000447375 FCHO1O14526 889 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 PIP5K1BO14986 540 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 LSM1O15116 133 aaKnown RBP11.48□□□□□ -0.57
SSR4-205ENST00000447375 ITGA10O75578 1167 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 NEURL1O76050 574 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 HSPA4LO95757 839 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 ATP1B1P05026 303 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 TPOP07202 933 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 BGNP21810 368 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 HOXC12P31275 282 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 PTGS2P35354 604 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 SLC1A6P48664 564 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 ALDH9A1P49189 494 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 HLCSP50747 726 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 MGAT2Q10469 447 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 MAP4K2Q12851 820 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 STX3Q13277 289 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 ZNF267Q14586 743 aaPredicted RBP11.48□□□□□ -0.57
SSR4-205ENST00000447375 OR1C1Q15619 314 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 DEFB113Q30KQ7 82 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 ZNF750Q32MQ0 723 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 RFTN2Q52LD8 501 aaPredicted RBP11.48□□□□□ -0.57
SSR4-205ENST00000447375 XKR7Q5GH72 579 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 ZNF468Q5VIY5 522 aaPredicted RBP11.48□□□□□ -0.57
SSR4-205ENST00000447375 SPINK14Q6IE38 97 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 FAM71E1Q6IPT2 247 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 GALNTL5Q7Z4T8 443 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 CD163Q86VB7 1156 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 DDIASQ8IXT1 998 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 ANKRD42Q8N9B4 389 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 TMEM178AQ8NBL3 297 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 OR5L2Q8NGL0 311 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 AGR3Q8TD06 166 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 CNRIP1Q96F85 164 aaPredicted RBP11.48□□□□□ -0.57
SSR4-205ENST00000447375 PAIP2Q9BPZ3 127 aaKnown RBP11.48□□□□□ -0.57
SSR4-205ENST00000447375 MYNNQ9NPC7 610 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 RASSF1Q9NS23 344 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.48□□□□□ -0.57
SSR4-205ENST00000447375 ANKRD10Q9NXR5 420 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 TAS2R7Q9NYW3 318 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 COPS7AQ9UBW8 275 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 HAO1Q9UJM8 370 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 YARS2Q9Y2Z4 477 aaKnown RBP11.48□□□□□ -0.57
SSR4-205ENST00000447375 RAP2CQ9Y3L5 183 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 L3MBTL1Q9Y468 752 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 HRH3Q9Y5N1 445 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 ZNF780BQ9Y6R6 833 aa11.48□□□□□ -0.57
SSR4-205ENST00000447375 LYPLA1O75608 230 aaPredicted RBP11.47□□□□□ -0.57
SSR4-205ENST00000447375 ERAL1O75616 437 aaKnown RBP11.47□□□□□ -0.57
SSR4-205ENST00000447375 CLPSP04118 112 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 DDCP20711 480 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 S1PR1P21453 382 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 FEN1P39748 380 aaKnown RBP11.47□□□□□ -0.57
SSR4-205ENST00000447375 CYB561P49447 251 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 ST13P50502 369 aaKnown RBP11.47□□□□□ -0.57
SSR4-205ENST00000447375 HK2P52789 917 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 SLC37A1P57057 533 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 ERVK-8P63133 956 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 C2orf80Q0P641 193 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 FUT7Q11130 342 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 C16orf47Q6ZP98 133 aaPredicted RBP11.47□□□□□ -0.57
SSR4-205ENST00000447375 ZNF227Q86WZ6 799 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 CDC20BQ86Y33 519 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 GALNT12Q8IXK2 581 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 C9orf40Q8IXQ3 194 aa11.47□□□□□ -0.57
SSR4-205ENST00000447375 SAMD14Q8IZD0 417 aaPredicted RBP11.47□□□□□ -0.57
SSR4-205ENST00000447375 HORMAD2Q8N7B1 307 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms