RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 SHQ1Q6PI26 577 aaKnown RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 CRIP3Q6Q6R5 217 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 UGT2A3Q6UWM9 527 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 YRDCQ86U90 279 aaKnown RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 GLCCI1Q86VQ1 547 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 RCOR2Q8IZ40 523 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 SLC15A4Q8N697 577 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 CELF2-AS1Q8N7Q2 184 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 MORN4Q8NDC4 146 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 NUBPLQ8TB37 319 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 LKAAEAR1Q8TD35 194 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 PTPMT1Q8WUK0 201 aaPredicted RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 GTF3AQ92664 365 aaKnown RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 TAF15Q92804 592 aaKnown RBP eCLIP2.87□□□□□ -1.95
PMS1-215ENST00000447232 S100PBPQ96BU1 408 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 OLFM3Q96PB7 478 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 EBNA1BP2Q99848 306 aaKnown RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 DHRS9Q9BPW9 319 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 ZNF670Q9BS34 389 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 MEGF9Q9H1U4 602 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 GANQ9H2C0 597 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 NTN4Q9HB63 628 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 MYOZ1Q9NP98 299 aaPredicted RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 NGBQ9NPG2 151 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 HOMER3Q9NSC5 361 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 GAR1Q9NY12 217 aaKnown RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 WWOXQ9NZC7 414 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 CFAP45Q9UL16 551 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 RUVBL2Q9Y230 463 aaKnown RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 SNX8Q9Y5X2 465 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 B4DSR2 109 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 E7ENX8 843 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 AVILO75366 819 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 FGFR1OPO95684 399 aaKnown RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 BCL10O95999 233 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 KNG1P01042 644 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 RNH1P13489 461 aaKnown RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 ALOX12P18054 663 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 IL11P20809 199 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 AOAHP28039 575 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 TLX1P31314 330 aaPredicted RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 GRK3P35626 688 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 STARP49675 285 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 IRF9Q00978 393 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 BMPR2Q13873 1038 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 P2RY6Q15077 328 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 TIGD3Q6B0B8 471 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 NIPAL1Q6NVV3 410 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 LEG1Q6P5S2 330 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 RANBP10Q6VN20 620 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 TAS2R42Q7RTR8 314 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 P4HA3Q7Z4N8 544 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 ADCK2Q7Z695 626 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 ASPGQ86U10 573 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 TMEM132CQ8N3T6 1108 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 TEX29Q8N6K0 151 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 PLD5Q8N7P1 536 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 IPMKQ8NFU5 416 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 Q8TCH9 128 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 SLC13A3Q8WWT9 602 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 FIG4Q92562 907 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 TMEM186Q96B77 213 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 RHBDF1Q96CC6 855 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 TMEM41AQ96HV5 264 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 RILPQ96NA2 401 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 PRAP1Q96NZ9 151 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 FCRL5Q96RD9 977 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 HBEGFQ99075 208 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 FAM129AQ9BZQ8 928 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 OR2B2Q9GZK3 357 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 TMEM184CQ9NVA4 438 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 HIF1ANQ9NWT6 349 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 AURKAIP1Q9NWT8 199 aaPredicted RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 MRFAP1Q9Y605 127 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 ABCA13Q86UQ4 5058 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 UBR4Q5T4S7 5183 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 DNAH7Q8WXX0 4024 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 LOC105371242A0A075B767 164 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 RBMY1BA6NDE4 496 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 RBMY1EA6NEQ0 496 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 DNAJC9-AS1A6NH13 148 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 MYO1CO00159 1063 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 LCMT2O60294 686 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 OR1I1O60431 355 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SMC2O95347 1197 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 CRTAMO95727 393 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 RBMY1DP0C7P1 496 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 FAHP16930 419 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 GCKP35557 465 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 COILP38432 576 aaPredicted RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 CLDN15P56746 228 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 HSD17B7P56937 341 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 KRTAP10-3P60369 221 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 SKP1P63208 163 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 WASHC5Q12768 1159 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 MPP3Q13368 585 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 CTU2Q2VPK5 515 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.86□□□□□ -1.95
PMS1-215ENST00000447232 ISM2Q6H9L7 571 aa2.86□□□□□ -1.95
PMS1-215ENST00000447232 C1QL2Q7Z5L3 287 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms