RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PLET1Q6UQ28 207 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 ZNF366Q8N895 744 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 SLAIN1Q8ND83 568 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 GON7Q9BXV9 100 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 ACOXLQ9NUZ1 547 aa17.99■□□□□ 0.47
SDCBP-204ENST00000447182 RBFOX1Q9NWB1 397 aaKnown RBP17.99■□□□□ 0.47
SDCBP-204ENST00000447182 CUEDC1Q9NWM3 386 aaPredicted RBP17.99■□□□□ 0.47
SDCBP-204ENST00000447182 CKAP5Q14008 2032 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 CASC3O15234 703 aaKnown RBP17.98■□□□□ 0.47
SDCBP-204ENST00000447182 SLC2A2P11168 524 aaPredicted RBP17.98■□□□□ 0.47
SDCBP-204ENST00000447182 ERP29P30040 261 aaKnown RBP17.98■□□□□ 0.47
SDCBP-204ENST00000447182 SSTR4P31391 388 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 HSD17B2P37059 387 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 MAN2A2P49641 1150 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 TRA2BP62995 288 aaKnown RBP17.98■□□□□ 0.47
SDCBP-204ENST00000447182 TEAD2Q15562 447 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 PEX5LQ8IYB4 626 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 TEX47Q8TBZ9 253 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 UBASH3BQ8TF42 649 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 SAP130Q9H0E3 1048 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 GLIPR2Q9H4G4 154 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 DDX31Q9H8H2 851 aaKnown RBP17.98■□□□□ 0.47
SDCBP-204ENST00000447182 NDUFS4O43181 175 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 MOSPD3O75425 235 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 ALAS2P22557 587 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 APEX1P27695 318 aaKnown RBP17.98■□□□□ 0.47
SDCBP-204ENST00000447182 KHKP50053 298 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 EPHA5P54756 1037 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 CD83Q01151 205 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 UBE3DQ7Z6J8 389 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 TRIM48Q8IWZ4 208 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 Q8N402 240 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 C19orf18Q8NEA5 215 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 ANKK1Q8NFD2 765 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 SLC9A6Q92581 669 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 HHIPL1Q96JK4 782 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 AMDHD1Q96NU7 426 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 TRAF4Q9BUZ4 470 aaPredicted RBP17.98■□□□□ 0.47
SDCBP-204ENST00000447182 PCBD2Q9H0N5 130 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 KCNK12Q9HB15 430 aa17.98■□□□□ 0.47
SDCBP-204ENST00000447182 UBXN7O94888 489 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 PRNPP04156 253 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 FAM157BP0CG42 384 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 DRD2P14416 443 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 METAP1P53582 386 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 GALK2Q01415 458 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 TATDN3Q17R31 274 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 SNAP47Q5SQN1 464 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 TRIQKQ629K1 86 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 MZT2BQ6NZ67 158 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 CNIH2Q6PI25 160 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 ANKRD33Q7Z3H0 272 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 ARIH2OSQ8N7S6 290 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 POGLUT1Q8NBL1 392 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 SUN3Q8TAQ9 357 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 ZFAND1Q8TCF1 268 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 GNPDA2Q8TDQ7 276 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 TFGQ92734 400 aaPredicted RBP17.97■□□□□ 0.47
SDCBP-204ENST00000447182 OTUB2Q96DC9 234 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 SLC38A2Q96QD8 506 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 EGLN3Q9H6Z9 239 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 TRPV5Q9NQA5 729 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 TOR4AQ9NXH8 423 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 COMMD3Q9UBI1 195 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 TRPC4Q9UBN4 977 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 COL4A3Q01955 1670 aa17.97■□□□□ 0.47
SDCBP-204ENST00000447182 A0A087WUU8 490 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 CASKO14936 926 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 LRRTM2O43300 516 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 APOL3O95236 402 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 FGBP02675 491 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 CHRM4P08173 479 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 C6P13671 934 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 IFNGR2P38484 337 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 SLC6A11P48066 632 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 ACSM1Q08AH1 577 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 GNA13Q14344 377 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 OR7G1Q8NGA0 311 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 NR4A3Q92570 626 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 ZFYVE19Q96K21 471 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 PINK1Q9BXM7 581 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 PRRG3Q9BZD7 231 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 ZCCHC3Q9NUD5 404 aaKnown RBP17.96■□□□□ 0.47
SDCBP-204ENST00000447182 A0A0A6YYD5 115 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 FEZF1A0PJY2 475 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 SMIM30A4D0T7 59 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 KIAA0355O15063 1070 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 FGF19O95750 216 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 ADH1AP07327 375 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 EVX1P49640 407 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 ANXA11P50995 505 aaKnown RBP17.96■□□□□ 0.47
SDCBP-204ENST00000447182 GNG2P59768 71 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 FUT5Q11128 374 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 FAPQ12884 760 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 TSPAN31Q12999 210 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 EFR3AQ14156 821 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 PRAMEF8Q5VWM4 474 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 PRAMEF7Q5VXH5 474 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 TMEM64Q6YI46 380 aa17.96■□□□□ 0.47
SDCBP-204ENST00000447182 RASSF6Q6ZTQ3 369 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms