RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PPM1BO75688 479 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 TRAPPC6AO75865 159 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 BCAS2O75934 225 aaPredicted RBP18.42■□□□□ 0.54
LRCH3-208ENST00000443727 CBX7O95931 251 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 NAGAP17050 411 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 CHRNB4P30926 498 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 PTGER4P35408 488 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 TRPC1P48995 793 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 DCAF7P61962 342 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 ZNF763Q0D2J5 394 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 C2orf80Q0P641 193 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 ERCC6LQ2NKX8 1250 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 LIPMQ5VYY2 423 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 B3GNT6Q6ZMB0 384 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 TICAM1Q8IUC6 712 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 RPRMLQ8N4K4 120 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 SIMC1Q8NDZ2 872 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 OR9A2Q8NGT5 310 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 KAT2AQ92830 837 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 CTHRC1Q96CG8 243 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 BBS4Q96RK4 519 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 ANGPTL4Q9BY76 406 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 SLC6A15Q9H2J7 730 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 ACKR4Q9NPB9 350 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 MIEF1Q9NQG6 463 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 SLC35C2Q9NQQ7 365 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 RNF6Q9Y252 685 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 DNAJC13O75165 2243 aa18.42■□□□□ 0.54
LRCH3-208ENST00000443727 C19orf84I3L1E1 186 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 ABCB1P08183 1280 aaPredicted RBP18.41■□□□□ 0.54
LRCH3-208ENST00000443727 UROSP10746 265 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 MPIP34949 423 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 CASP3P42574 277 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 NUP107P57740 925 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 VSNL1P62760 191 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 SLC18A2Q05940 514 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 DUSP8Q13202 625 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 TOMM20Q15388 145 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 ZNF628Q5EBL2 1059 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 CCDC71Q8IV32 467 aaPredicted RBP18.41■□□□□ 0.54
LRCH3-208ENST00000443727 C10orf107Q8IVU9 208 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 FAM9CQ8IZT9 166 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 ZNF675Q8TD23 568 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 ERP27Q96DN0 273 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 OMA1Q96E52 524 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 SIRT5Q9NXA8 310 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 EHD3Q9NZN3 535 aa18.41■□□□□ 0.54
LRCH3-208ENST00000443727 POLR3HQ9Y535 204 aaPredicted RBP18.41■□□□□ 0.54
LRCH3-208ENST00000443727 CREBBPQ92793 2442 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 C15orf38-AP3S2A0A0A6YYH1 394 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 FAM90A27PA6NNH2 459 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 WDR1O75083 606 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 DDCP20711 480 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 DRD5P21918 477 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 PPICP45877 212 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 EMDP50402 254 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 CLEC6AQ6EIG7 209 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 NUP54Q7Z3B4 507 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 TRIM46Q7Z4K8 759 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 GDF7Q7Z4P5 450 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 RIBC1Q8N443 379 aaPredicted RBP18.4■□□□□ 0.54
LRCH3-208ENST00000443727 NEIL3Q8TAT5 605 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 C11orf24Q96F05 449 aaPredicted RBP18.4■□□□□ 0.54
LRCH3-208ENST00000443727 APOPT1Q96IL0 206 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 ANKRA2Q9H9E1 313 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 SPRR3Q9UBC9 169 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 FIS1Q9Y3D6 152 aa18.4■□□□□ 0.54
LRCH3-208ENST00000443727 FRG2CA6NGY1 282 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 SEC22BO75396 215 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 RSL1D1O76021 490 aaKnown RBP18.39■□□□□ 0.53
LRCH3-208ENST00000443727 CHEK2O96017 543 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 KIR3DL1P43629 444 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 C1orf185Q5T7R7 199 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 LILRB4Q8NHJ6 448 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 FAM76AQ8TAV0 307 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 GNRHR2Q96P88 292 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 TTYH2Q9BSA4 534 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 TNFRSF12AQ9NP84 129 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 KCNJ16Q9NPI9 418 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 KLRF1Q9NZS2 232 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 GPR55Q9Y2T6 319 aaPredicted RBP18.39■□□□□ 0.53
LRCH3-208ENST00000443727 C15orf41Q9Y2V0 281 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 ABCA12Q86UK0 2595 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 MYO9AB2RTY4 2548 aa18.39■□□□□ 0.53
LRCH3-208ENST00000443727 SLC28A1O00337 649 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 GNB5O14775 395 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 RGS14O43566 566 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 TRIM13O60858 407 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 REM1O75628 298 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 HOXD4P09016 255 aaPredicted RBP18.38■□□□□ 0.53
LRCH3-208ENST00000443727 NUDT17P0C025 328 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 GLI4P10075 376 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 GABRA1P14867 456 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 ENDOUP21128 410 aaKnown RBP18.38■□□□□ 0.53
LRCH3-208ENST00000443727 NTSP30990 170 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 SOX18P35713 384 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 KRT20P35900 424 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 NCBP2P52298 156 aaKnown RBP eCLIP18.38■□□□□ 0.533e-12■□□□□ 9.7
LRCH3-208ENST00000443727 PCLAFQ15004 111 aa18.38■□□□□ 0.53
LRCH3-208ENST00000443727 NOXRED1Q6NXP6 359 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms