RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 VSTM2LQ96N03 204 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 CXorf36Q9H7Y0 433 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 FOLH1BQ9HBA9 442 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 NTMQ9P121 344 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 ABI3Q9P2A4 366 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 BCAS2O75934 225 aaPredicted RBP14.8□□□□□ -0.04
USP39-205ENST00000442708 SORBS2O94875 1100 aaKnown RBP14.8□□□□□ -0.04
USP39-205ENST00000442708 SLITRK5O94991 958 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 IFI6P09912 130 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 MRPL19P49406 292 aaKnown RBP14.8□□□□□ -0.04
USP39-205ENST00000442708 CORO7P57737 925 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 HBA1P69905 142 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 OC90Q02509 493 aaPredicted RBP14.8□□□□□ -0.04
USP39-205ENST00000442708 SRSF11Q05519 484 aaKnown RBP14.8□□□□□ -0.04
USP39-205ENST00000442708 ZNF169Q14929 603 aaPredicted RBP14.8□□□□□ -0.04
USP39-205ENST00000442708 RPS6KA2Q15349 733 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 ZNF791Q3KP31 576 aaPredicted RBP14.8□□□□□ -0.04
USP39-205ENST00000442708 IL20RBQ6UXL0 311 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 NPSR1Q6W5P4 371 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 MDGA2Q7Z553 956 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 ANKRD46Q86W74 232 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 PRR22Q8IZ63 422 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 PSMA8Q8TAA3 256 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 ASB15Q8WXK1 588 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 TP53INP1Q96A56 240 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 GIMAP5Q96F15 307 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 TMEM120AQ9BXJ8 343 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.8□□□□□ -0.04
USP39-205ENST00000442708 ZNF385DQ9H6B1 395 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 DDX18Q9NVP1 670 aaKnown RBP14.8□□□□□ -0.04
USP39-205ENST00000442708 ZIM2Q9NZV7 527 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 LRFN1Q9P244 771 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 MAP10Q9P2G4 905 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 MAPRE3Q9UPY8 281 aa14.8□□□□□ -0.04
USP39-205ENST00000442708 COPG1Q9Y678 874 aaKnown RBP14.8□□□□□ -0.04
USP39-205ENST00000442708 RNASET2O00584 256 aaKnown RBP14.79□□□□□ -0.04
USP39-205ENST00000442708 SUV39H1O43463 412 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 ABCB1P08183 1280 aaPredicted RBP14.79□□□□□ -0.04
USP39-205ENST00000442708 CT45A8P0DMV1 189 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 CT45A9P0DMV2 189 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 DDX5P17844 614 aaKnown RBP14.79□□□□□ -0.04
USP39-205ENST00000442708 DRD5P21918 477 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 S100A3P33764 101 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 KIR3DL1P43629 444 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 PPICP45877 212 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 CYB561P49447 251 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 SEC24CP53992 1094 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 TLR1Q15399 786 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 PRR30Q53SZ7 412 aaPredicted RBP14.79□□□□□ -0.04
USP39-205ENST00000442708 CT45A2Q5DJT8 189 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 HLA-DQA1Q5Y7H0 255 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 FUNDC1Q8IVP5 155 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 MIER2Q8N344 545 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 TMEM156Q8N614 296 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 NATD1Q8N6N6 113 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 C17orf47Q8NEP4 570 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 FAM120BQ96EK7 910 aaKnown RBP14.79□□□□□ -0.04
USP39-205ENST00000442708 BTBD9Q96Q07 612 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 SIKE1Q9BRV8 207 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 KLHL1Q9NR64 748 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 TAS2R9Q9NYW1 312 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 PRODH2Q9UF12 536 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 GPR55Q9Y2T6 319 aaPredicted RBP14.79□□□□□ -0.04
USP39-205ENST00000442708 PCDHGA10Q9Y5H3 936 aa14.79□□□□□ -0.04
USP39-205ENST00000442708 TRAV17A0A0B4J275 112 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 A8MVJ9 347 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 EMC8O43402 210 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 ERN1O75460 977 aaKnown RBP14.78□□□□□ -0.04
USP39-205ENST00000442708 C1QCP02747 245 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 SP1P08047 785 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 FBXO45P0C2W1 286 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 TROVE2P10155 538 aaKnown RBP eCLIP14.78□□□□□ -0.04
USP39-205ENST00000442708 CASRP41180 1078 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 MAP3K8P41279 467 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 PRKAG1P54619 331 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 PSG6Q00889 435 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 ZNF155Q12901 538 aaPredicted RBP14.78□□□□□ -0.04
USP39-205ENST00000442708 DPY19L1Q2PZI1 675 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 ZNF766Q5HY98 468 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 DESI1Q6ICB0 168 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 CYP4Z2PQ8N1L4 340 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 CLEC4FQ8N1N0 589 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 SLC15A4Q8N697 577 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 NUP43Q8NFH3 380 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 OR4N2Q8NGD1 307 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 OR5AK3PQ8NH89 298 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 SLC22A8Q8TCC7 542 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 HOXB13Q92826 284 aaPredicted RBP14.78□□□□□ -0.04
USP39-205ENST00000442708 CHMP6Q96FZ7 201 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 SCMH1Q96GD3 660 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 C16orf58Q96GQ5 468 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 LCORQ96JN0 433 aaPredicted RBP14.78□□□□□ -0.04
USP39-205ENST00000442708 RILPQ96NA2 401 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 ZBTB18Q99592 522 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 INPP5KQ9BT40 448 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 EQTNQ9NQ60 294 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 HPF1Q9NWY4 346 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 ANAPC2Q9UJX6 822 aa14.78□□□□□ -0.04
USP39-205ENST00000442708 CFL2Q9Y281 166 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms