RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 NPRL3Q12980 569 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 Q6ZPB1 254 aaPredicted RBP13.35□□□□□ -0.27
LIMD1-202ENST00000440097 P3H2Q8IVL5 708 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 OR2L5Q8NG80 312 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 TPSD1Q9BZJ3 242 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 AICDAQ9GZX7 198 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 PAQR5Q9NXK6 330 aaPredicted RBP13.35□□□□□ -0.27
LIMD1-202ENST00000440097 TRPC4Q9UBN4 977 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 ADAM29Q9UKF5 820 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 LYVE1Q9Y5Y7 322 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 A0A0A6YYD5 115 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 OR6C74A6NCV1 312 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 TMEM229AB2RXF0 380 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 PRAMEF26H0Y7S4 382 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 SNX4O95219 450 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 IFNA14P01570 189 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 NTSP30990 170 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 AHRP35869 848 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 CCT3P49368 545 aaKnown RBP13.35□□□□□ -0.27
LIMD1-202ENST00000440097 GNG2P59768 71 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 YPEL5P62699 121 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 GPR18Q14330 331 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 TBCEQ15813 527 aaPredicted RBP13.35□□□□□ -0.27
LIMD1-202ENST00000440097 RPS26P11Q5JNZ5 115 aaPredicted RBP13.35□□□□□ -0.27
LIMD1-202ENST00000440097 RFPL4BQ6ZWI9 263 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 DGLUCYQ7Z3D6 616 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 C6orf120Q7Z4R8 191 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 OR8H2Q8N162 312 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 KCT2Q8NC54 265 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 SIMC1Q8NDZ2 872 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 SLC22A18Q96BI1 424 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 TBC1D20Q96BZ9 403 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 TMEM38AQ9H6F2 299 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 CA14Q9ULX7 337 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 CARD8Q9Y2G2 431 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 ATG4BQ9Y4P1 393 aa13.35□□□□□ -0.27
LIMD1-202ENST00000440097 PNMA8CA0A1B0GUJ8 204 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 C4orf51C9J302 202 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 LOC110117498-PIK3R3F6TDL0 507 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 TNFRSF10CO14798 259 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 MBTPS2O43462 519 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 TNFP01375 233 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 CTSEP14091 401 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 UGT2B15P54855 530 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 ITGA1P56199 1179 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 STXBP1P61764 594 aaKnown RBP13.34□□□□□ -0.27
LIMD1-202ENST00000440097 BTN3A2P78410 334 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 GPR50Q13585 617 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 IFI44LQ53G44 452 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 ABHD17CQ6PCB6 329 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 FAM160A2Q8N612 972 aaPredicted RBP13.34□□□□□ -0.27
LIMD1-202ENST00000440097 NATD1Q8N6N6 113 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 HORMAD2Q8N7B1 307 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 ZNF675Q8TD23 568 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 OTUB1Q96FW1 271 aaPredicted RBP13.34□□□□□ -0.27
LIMD1-202ENST00000440097 PITX2Q99697 317 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 TCEAL2Q9H3H9 227 aaPredicted RBP13.34□□□□□ -0.27
LIMD1-202ENST00000440097 SLC35C2Q9NQQ7 365 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 ZCCHC3Q9NUD5 404 aaKnown RBP13.34□□□□□ -0.27
LIMD1-202ENST00000440097 MDC1Q14676 2089 aaKnown RBP13.34□□□□□ -0.27
LIMD1-202ENST00000440097 SCN3AQ9NY46 2000 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 CTDSP2O14595 271 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 DDOSTP39656 456 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 RABIFP47224 123 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 DGKEP52429 567 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 CRISP3P54108 245 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 SPIBQ01892 262 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 TBRG1Q3YBR2 411 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 ZNF517Q6ZMY9 492 aaPredicted RBP13.34□□□□□ -0.27
LIMD1-202ENST00000440097 TAF8Q7Z7C8 310 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 CCDC190Q86UF4 302 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 SRFBP1Q8NEF9 429 aaKnown RBP13.34□□□□□ -0.27
LIMD1-202ENST00000440097 ZCCHC10Q8TBK6 192 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 PIK3R3Q92569 461 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 GAS2L1Q99501 681 aaPredicted RBP13.34□□□□□ -0.27
LIMD1-202ENST00000440097 PSORS1C1Q9UIG5 152 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 ZNF451Q9Y4E5 1061 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 PCDHGA6Q9Y5G7 932 aa13.34□□□□□ -0.27
LIMD1-202ENST00000440097 PGRMC2O15173 223 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 IGHV4-34P06331 123 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 SLC35G6P0C7Q6 338 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 DRD2P14416 443 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 ATP5A1P25705 553 aaKnown RBP13.33□□□□□ -0.27
LIMD1-202ENST00000440097 FEN1P39748 380 aaKnown RBP13.33□□□□□ -0.27
LIMD1-202ENST00000440097 ETV6P41212 452 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 PPM1FP49593 454 aaPredicted RBP13.33□□□□□ -0.27
LIMD1-202ENST00000440097 HYAL2Q12891 473 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 C1orf61Q13536 156 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 ZNF750Q32MQ0 723 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 REEP3Q6NUK4 255 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 GPR153Q6NV75 609 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 ZNF761Q86XN6 746 aaPredicted RBP13.33□□□□□ -0.27
LIMD1-202ENST00000440097 SFTPA2Q8IWL1 248 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 CCDC116Q8IYX3 515 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 SLC22A18ASQ8N1D0 253 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 DEFB119Q8N690 84 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 XAGE5Q8WWM1 108 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 NEURL3Q96EH8 262 aa13.33□□□□□ -0.27
LIMD1-202ENST00000440097 C7orf34Q96L11 122 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms