RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 EFSO43281 561 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 SUV39H1O43463 412 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 HS6ST1O60243 411 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 PDE9AO76083 593 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ATE1O95260 518 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 OXSR1O95747 527 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ANGPTL1O95841 491 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 SLC16A8O95907 504 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 HOXC4P09017 264 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 C1GALT1C1LP0DN25 315 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 GDF5P43026 501 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 OR1D4P47884 311 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 PLA2G16P53816 162 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 VSX2P58304 361 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 SELENOWP63302 87 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 GPLD1P80108 840 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 DOC2AQ14183 400 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 MAD2L1BPQ15013 274 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 RGNQ15493 299 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 DGUOKQ16854 277 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 DEFB109BQ30KR1 87 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 IQCCQ4KMZ1 466 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 XKR6Q5GH73 641 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 OTUD3Q5T2D3 398 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 GPR107Q5VW38 600 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 LCN10Q6JVE6 187 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 TTLL10Q6ZVT0 673 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 PRICKLE2Q7Z3G6 844 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF554Q86TJ5 538 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 PPP1R3BQ86XI6 285 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 LACC1Q8IV20 430 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 METTL4Q8N3J2 472 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 LINC01555Q8NAE3 123 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 OR4D9Q8NGE8 314 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 SNIP1Q8TAD8 396 aaKnown RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 FAM110BQ8TC76 370 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 RORBQ92753 470 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 COX4I2Q96KJ9 171 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 C7orf34Q96L11 122 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 MAPKAP1Q9BPZ7 522 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 LHPPQ9H008 270 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 SPRTNQ9H040 489 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 KIR3DX1Q9H7L2 352 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 TPT1P8Q9HAU6 139 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 PRDM9Q9NQV7 894 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 POT1Q9NUX5 634 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ACTR10Q9NZ32 417 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 CNOT2Q9NZN8 540 aaKnown RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ITGB1BP2Q9UKP3 347 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 ACSL5Q9ULC5 683 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 SLC22A14Q9Y267 594 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 HEATR5BQ9P2D3 2071 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 MN1Q10571 1320 aaPredicted RBP4.48□□□□□ -1.69
EDEM3-203ENST00000439962 CROCCQ5TZA2 2017 aa4.48□□□□□ -1.69
EDEM3-203ENST00000439962 AKAP6Q13023 2319 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 LOC101059948A0A1B0GTJ6 334 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 MYOCOSA0A1B0GUC4 107 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 ISPDA4D126 451 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 ZNF860A6NHJ4 632 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 STMND1H3BQB6 276 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 H7BY64 318 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 KPNA4O00629 521 aaPredicted RBP4.47□□□□□ -1.69
EDEM3-203ENST00000439962 ATXN7O15265 892 aaPredicted RBP4.47□□□□□ -1.69
EDEM3-203ENST00000439962 RGS10O43665 173 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 TNFRSF21O75509 655 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 SCRG1O75711 98 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 C1orf105O95561 183 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 IFI6P09912 130 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 PIPP12273 146 aaPredicted RBP4.47□□□□□ -1.69
EDEM3-203ENST00000439962 UGT2B7P16662 529 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 EEF1B2P24534 225 aaKnown RBP4.47□□□□□ -1.69
EDEM3-203ENST00000439962 IMPA1P29218 277 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 DLSTP36957 453 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 FRKP42685 505 aaPredicted RBP4.47□□□□□ -1.69
EDEM3-203ENST00000439962 GPR3P46089 330 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 SMIM11AP58511 58 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 RAE1P78406 368 aaKnown RBP4.47□□□□□ -1.69
EDEM3-203ENST00000439962 ZFP36L1Q07352 338 aaKnown RBP4.47□□□□□ -1.69
EDEM3-203ENST00000439962 KRR1Q13601 381 aaKnown RBP4.47□□□□□ -1.69
EDEM3-203ENST00000439962 ZIC1Q15915 447 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 ZXDCQ2QGD7 858 aaPredicted RBP4.47□□□□□ -1.69
EDEM3-203ENST00000439962 PGS1Q32NB8 556 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 IFI44LQ53G44 452 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 PRAMEF8Q5VWM4 474 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 PRAMEF7Q5VXH5 474 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 CDCP2Q5VXM1 449 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 OR4F3Q6IEY1 312 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 NIPAL1Q6NVV3 410 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 XKR5Q6UX68 686 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 PDZD3Q86UT5 571 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 ARMC8Q8IUR7 673 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 LRRC56Q8IYG6 542 aaPredicted RBP4.47□□□□□ -1.69
EDEM3-203ENST00000439962 OFCC1Q8IZS5 231 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 KRT78Q8N1N4 520 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 OR7G3Q8NG95 312 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 OR6C4Q8NGE1 309 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 OR9A1PQ8NGU1 263 aa4.47□□□□□ -1.69
EDEM3-203ENST00000439962 PSMA8Q8TAA3 256 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms