RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 EPPINO95925 133 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 ACADMP11310 421 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 ADRB3P13945 408 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 RPS5P46782 204 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 GIPRP48546 466 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 HYAL2Q12891 473 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 HNRNPA0Q13151 305 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 ACSM5Q6NUN0 579 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 C1orf94Q6P1W5 598 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 UBE3DQ7Z6J8 389 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 PSD4Q8NDX1 1056 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 OR5D16Q8NGK9 328 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 CREB3L4Q8TEY5 395 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 RGMAQ96B86 450 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 MENTQ9BUN1 341 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 PITHD1Q9GZP4 211 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 ABCB9Q9NP78 766 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 MRPS18AQ9NVS2 196 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 TAS2R7Q9NYW3 318 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 PLEKHB1Q9UF11 243 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 FBXW2Q9UKT8 454 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 MUC22E2RYF6 1773 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 FAM172BPA6NC97 362 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 SEC14L5O43304 696 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 EPHX1P07099 455 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 CLEC2LP0C7M8 214 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 NR2F1P10589 423 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 PPP2R1BP30154 601 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 HSD17B2P37059 387 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 WNT4P56705 351 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 MXD1Q05195 221 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 SCN1BQ07699 218 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 TMEM52BQ4KMG9 183 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 ENTPD8Q5MY95 495 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 C9orf64Q5T6V5 341 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 C1QTNF12Q5T7M4 302 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 XKRXQ6PP77 449 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 IQCHQ86VS3 1027 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 OR5K2Q8NHB8 316 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 BBS10Q8TAM1 723 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 UCN3Q969E3 161 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 ELSPBP1Q96BH3 223 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 COX14Q96I36 57 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 PRRC1Q96M27 445 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 GPA33Q99795 319 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 MED18Q9BUE0 208 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 PCBD2Q9H0N5 130 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 TPK1Q9H3S4 243 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 DDX31Q9H8H2 851 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 BCL2L10Q9HD36 194 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 FGF20Q9NP95 211 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 TIGARQ9NQ88 270 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 SLC9A8Q9Y2E8 581 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 TMEM98Q9Y2Y6 226 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 ATG2BQ96BY7 2078 aa15.45■□□□□ 0.06
CLCNKA-203ENST00000439316 A0A0A6YYD5 115 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 A0A1W2PPV9 198 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 PSMB5P28074 263 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 GDI1P31150 447 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 GJA4P35212 333 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 KHKP50053 298 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 TRA2BP62995 288 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 KLHL22Q53GT1 634 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 C22orf42Q6IC83 251 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 FAM131AQ6UXB0 335 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 ERN2Q76MJ5 926 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 AMZ2Q86W34 360 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 XAGE5Q8WWM1 108 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 OR8D1Q8WZ84 308 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 AMDHD1Q96NU7 426 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 PHOX2BQ99453 314 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 SLC22A4Q9H015 551 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 TMEM245Q9H330 911 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 GLIPR2Q9H4G4 154 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 ISYNA1Q9NPH2 558 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 SLC23A2Q9UGH3 650 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 SPIN1Q9Y657 262 aaPredicted RBP15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 TMEM129A0AVI4 362 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 MEIOCA2RUB1 952 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 HMX3A6NHT5 357 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 H7BY64 318 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 RPN2P04844 631 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 ACP2P11117 423 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 MYL12AP19105 171 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 IGFBP4P22692 258 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 SLC9A3P48764 834 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 SMSP52788 366 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 TAB1Q15750 504 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 PLK5Q496M5 336 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 HSDL2Q6YN16 418 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 MRGPREQ86SM8 312 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 LAPTM4BQ86VI4 370 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 KIF18BQ86Y91 864 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 AMER3Q8N944 861 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 GDPD1Q8N9F7 314 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 TP53I13Q8NBR0 393 aaPredicted RBP15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 OR6T1Q8NGN1 323 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 KIAA1143Q96AT1 154 aaPredicted RBP15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 PRAP1Q96NZ9 151 aa15.44■□□□□ 0.06
CLCNKA-203ENST00000439316 KCNK12Q9HB15 430 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms