RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 ORAI3Q9BRQ5 295 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 NLNQ9BYT8 704 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 OR51J1Q9H342 316 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 METTL17Q9H7H0 456 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 PTGFRNQ9P2B2 879 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 DIMT1Q9UNQ2 313 aaKnown RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SEC14L5O43304 696 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 ADAP00813 363 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 OR56A5P0C7T3 313 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SHC1P29353 583 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 BTCP35070 178 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 RING1Q06587 406 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 PLD1Q13393 1074 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 ADAM15Q13444 863 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 GGTA1PQ4G0N0 100 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 GARNL3Q5VVW2 1013 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 MEDAGQ5VYS4 303 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 C12orf73Q69YU5 71 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SFRP4Q6FHJ7 346 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 MSANTD1Q6ZTZ1 278 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 MRPL10Q7Z7H8 261 aaKnown RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 RTN4RL1Q86UN2 441 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SPRYD4Q8WW59 207 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SPRTNQ9H040 489 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 PIGUQ9H490 435 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 ZDHHC3Q9NYG2 299 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 CFAP97Q9P2B7 532 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SEC14L3Q9UDX4 400 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 NTNG1Q9Y2I2 539 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 PCDHGB7Q9Y5F8 929 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 CSNK1G3Q9Y6M4 447 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SZT2Q5T011 3432 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 DPM1O60762 260 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 PLATP00750 562 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 HPXP02790 462 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 ANXA3P12429 323 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SLC6A1P30531 599 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 MTNR1AP48039 350 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 DGKGP49619 791 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 HMGA2P52926 109 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 STXBP1P61764 594 aaKnown RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 OC90Q02509 493 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 PTSQ03393 145 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 KLHL12Q53G59 568 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SFRP5Q5T4F7 317 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 ADGRF1Q5T601 910 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 FAM92BQ6ZTR7 304 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 LUZP2Q86TE4 346 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 GTF3C2Q8WUA4 911 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 ST8SIA4Q92187 359 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 RFT1Q96AA3 541 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SECISBP2Q96T21 854 aaKnown RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 KCNJ15Q99712 375 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 ZDHHC6Q9H6R6 413 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 MED20Q9H944 212 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 TDP1Q9NUW8 608 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 CXXC1Q9P0U4 656 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 TRPC4Q9UBN4 977 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 CORO2BQ9UQ03 480 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 SIRT4Q9Y6E7 314 aaPredicted RBP12.64□□□□□ -0.39
ACTN1-204ENST00000438964 ALPK2Q86TB3 2170 aa12.64□□□□□ -0.39
ACTN1-204ENST00000438964 VWA8A3KMH1 1905 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 TEX51A0A1B0GUA7 166 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 CHURC1-FNTBB4DL54 471 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 RNASET2O00584 256 aaKnown RBP12.63□□□□□ -0.39
ACTN1-204ENST00000438964 SLC28A2O43868 658 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 LGI1O95970 557 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 TPOP07202 933 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 HOXD4P09016 255 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-204ENST00000438964 PRPH2P23942 346 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 PSMA3P25788 255 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 KIAA1024LP59773 190 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 SIM1P81133 766 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-204ENST00000438964 PCDH1Q08174 1060 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 ZNF763Q0D2J5 394 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 SLBPQ14493 270 aaKnown RBP eCLIP12.63□□□□□ -0.39
ACTN1-204ENST00000438964 GRK1Q15835 563 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 ST3GAL2Q16842 350 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 GPR139Q6DWJ6 353 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 REEP3Q6NUK4 255 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 STPG2Q8N412 459 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 OXR1Q8N573 874 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 OR8D4Q8NGM9 314 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 COQ8AQ8NI60 647 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 RBPMSQ93062 196 aaKnown RBP12.63□□□□□ -0.39
ACTN1-204ENST00000438964 EXOSC8Q96B26 276 aaKnown RBP12.63□□□□□ -0.39
ACTN1-204ENST00000438964 FUBP3Q96I24 572 aaKnown RBP eCLIP12.63□□□□□ -0.39
ACTN1-204ENST00000438964 FCRL4Q96PJ5 515 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 DDOQ99489 341 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 HCN3Q9P1Z3 774 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 STOX2Q9P2F5 926 aaPredicted RBP12.63□□□□□ -0.39
ACTN1-204ENST00000438964 PLAGL1Q9UM63 463 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 RASD1Q9Y272 281 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 TMEM5Q9Y2B1 443 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 TRPM7Q96QT4 1865 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 TRBV5-4A0A0C4DH59 114 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 FURINP09958 794 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 ACSM4P0C7M7 580 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 ARAFP10398 606 aa12.63□□□□□ -0.39
ACTN1-204ENST00000438964 PPIBP23284 216 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms