RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SYPL1Q16563 259 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRAMEF19Q5SWL8 479 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMEM268Q5VZI3 342 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 NSUN5P2Q63ZY6 315 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 UGT3A1Q6NUS8 523 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 TTC33Q6PID6 262 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF474Q6S9Z5 364 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 LRRC74BQ6ZQY2 392 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 TPRG1Q6ZUI0 275 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ANKRD33Q7Z3H0 272 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 YTHDF3Q7Z739 585 aaKnown RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CCDC190Q86UF4 302 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CHSY1Q86X52 802 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CATSPERDQ86XM0 798 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PALB2Q86YC2 1186 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 NUDCD3Q8IVD9 361 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 C16orf71Q8IYS4 520 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 TEX26Q8N6G2 289 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CCNYL1Q8N7R7 359 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 SYT14Q8NB59 555 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC44A5Q8NCS7 719 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PAPD5Q8NDF8 572 aaKnown RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMEM104Q8NE00 496 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ABHD11Q8NFV4 315 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR2L3Q8NG85 312 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR1J2Q8NGS2 313 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 SPATA3Q8NHX4 192 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 HCAR2Q8TDS4 363 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 UBTD2Q8WUN7 234 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 NUDCD2Q8WVJ2 157 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 AKAP1Q92667 903 aaKnown RBP eCLIP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 SNAPC3Q92966 411 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 GLYATL1Q969I3 302 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PINX1Q96BK5 328 aaKnown RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 FBXL8Q96CD0 374 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 RAB39BQ96DA2 213 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 OTUB2Q96DC9 234 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 MRPL53Q96EL3 112 aaKnown RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 GUCD1Q96NT3 240 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 FRG2BQ96QU4 278 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CMKLR1Q99788 373 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 SH2D3AQ9BRG2 576 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 NAT9Q9BTE0 207 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 GSDMCQ9BYG8 508 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR2B2Q9GZK3 357 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 RIMS4Q9H426 269 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 MAGIXQ9H6Y5 334 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 Q9N2K0 584 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC40A1Q9NP59 571 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 MYOZ2Q9NPC6 264 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PHPT1Q9NRX4 125 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 DLL3Q9NYJ7 618 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 MIS18AQ9NYP9 233 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR14J1Q9UGF5 321 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 CLEC2DQ9UHP7 191 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PHF11Q9UIL8 331 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF580Q9UK33 172 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF346Q9UL40 294 aaKnown RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PLLPQ9Y342 182 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 PPIAL4AQ9Y536 164 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 NPTNQ9Y639 398 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 A3GALT2U3KPV4 340 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 MROH7-TTC4A0A0A0MT08 1334 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 FRMPD4Q14CM0 1322 aa3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 ATXN2Q99700 1313 aaKnown RBP3.33□□□□□ -1.88
HMGB1P12-201ENST00000438594 TRBV11-1A0A0K0K1C0 115 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 A0A1B0GW15 77 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 A0A1W2PQ72 361 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 A1L4Q6 167 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF99A8MXY4 864 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 E7ESA3 106 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 E9PQ18 207 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRAMEF26H0Y7S4 382 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 KLRC4-KLRK1H3BQV0 150 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SGK494L7N484 410 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 BTN3A3O00478 584 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 LRCH4O75427 683 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 RNF8O76064 485 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 NTN1O95631 604 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 IGHV2-70P01814 119 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 IL6P05231 212 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SNHG28P0DPA3 235 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 CTSAP10619 480 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 CYP11B1P15538 503 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF26P17031 533 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 MAGP20916 626 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 FCARP24071 287 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 PSMA2P25787 234 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 CYP2C18P33260 490 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 PTGER4P35408 488 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 CYLC1P35663 651 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC9A3P48764 834 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 STK19P49842 368 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SERPINB9P50453 376 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ART1P52961 327 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR2B6P58173 313 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 NXPH1P58417 271 aa3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 SNRPEP62304 92 aaKnown RBP3.32□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZXDBP98169 803 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms