RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 HERVK_113P63132 956 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ERVK-8P63133 956 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 TGM3Q08188 693 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 RPS6KA2Q15349 733 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ADPRMQ3LIE5 342 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 LIPNQ5VXI9 398 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ARMC3Q5W041 872 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 HLA-DQA1Q5Y7H0 255 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 OR2A2Q6IF42 318 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 SBSNQ6UWP8 590 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ANGPTL8Q6UXH0 198 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ZNF662Q6ZS27 426 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 CHMP1BQ7LBR1 199 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 GSTA5Q7RTV2 222 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 KRT78Q8N1N4 520 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ZNF610Q8N9Z0 462 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 OR14L1PQ8NHC6 308 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 RDH11Q8TC12 318 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 AKAP1Q92667 903 aaKnown RBP eCLIP7.82□□□□□ -1.16
SCRN1-208ENST00000438497 GTPBP3Q969Y2 492 aaKnown RBP7.82□□□□□ -1.16
SCRN1-208ENST00000438497 TP53INP1Q96A56 240 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 TMEM41AQ96HV5 264 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 FBXL20Q96IG2 436 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ZNF570Q96NI8 536 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 NDNQ99608 321 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ARPC5LQ9BPX5 153 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 RHNO1Q9BSD3 238 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 G6PC3Q9BUM1 346 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 CCDC28BQ9BUN5 200 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ERVK-6Q9BXR3 956 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 PHACTR1Q9C0D0 580 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ROGDIQ9GZN7 287 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 WWTR1Q9GZV5 400 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 SHARPINQ9H0F6 387 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 NT5DC2Q9H857 520 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 C20orf96Q9NUD7 363 aaPredicted RBP7.82□□□□□ -1.16
SCRN1-208ENST00000438497 TMEM160Q9NX00 188 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 CLCF1Q9UBD9 225 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 LPAR3Q9UBY5 353 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 PTBP2Q9UKA9 531 aaKnown RBP7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ERVK-19Q9WJR5 959 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 LRRC42Q9Y546 428 aa7.82□□□□□ -1.16
SCRN1-208ENST00000438497 EPN1Q9Y6I3 576 aaPredicted RBP7.82□□□□□ -1.16
SCRN1-208ENST00000438497 YLPM1P49750 1951 aaKnown RBP7.82□□□□□ -1.16
SCRN1-208ENST00000438497 ZCWPW2A0A1B0GU75 182 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 TCRBV7S3A2A0A539 114 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 SDR42E2A6NKP2 422 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 CCT8L1PA6NM43 557 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 OR6C76A6NM76 312 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 KCNAB3O43448 404 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 ADAM11O75078 769 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 CDH16O75309 829 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 ATP6V1G1O75348 118 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 CBR3O75828 277 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 TBX6O95947 436 aaPredicted RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 THBDP07204 575 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 ENO2P09104 434 aaPredicted RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 TPSB2P20231 275 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 GSTM2P28161 218 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 CDKN1AP38936 164 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 KIR2DL2P43627 348 aaPredicted RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 SLC6A12P48065 614 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 KCNC1P48547 511 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 SLC37A1P57057 533 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 IGLV3-21P80748 117 aaPredicted RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 FUT7Q11130 342 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 SLBPQ14493 270 aaKnown RBP eCLIP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 TPSAB1Q15661 275 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 AP5B1Q2VPB7 878 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 HSP90AA5PQ58FG0 334 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 C6orf52Q5T4I8 152 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 SLCO4C1Q6ZQN7 724 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 SYCE1Q8N0S2 351 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 ACOT4Q8N9L9 421 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 ZBTB8BQ8NAP8 495 aaPredicted RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 NOA1Q8NC60 698 aaKnown RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 BBOF1Q8ND07 529 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 SRFBP1Q8NEF9 429 aaKnown RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 DYDC1Q8WWB3 177 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 CTHRC1Q96CG8 243 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 PLPPR2Q96GM1 343 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 ZNF845Q96IR2 970 aaPredicted RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 KCNC2Q96PR1 638 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 NAP1L3Q99457 506 aaPredicted RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 TBCDQ9BTW9 1192 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 LACRTQ9GZZ8 138 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 SNX15Q9NRS6 342 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 IARS2Q9NSE4 1012 aaKnown RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 ZNF490Q9ULM2 529 aaPredicted RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 PAIP2BQ9ULR5 123 aaKnown RBP7.81□□□□□ -1.16
SCRN1-208ENST00000438497 LIPT1Q9Y234 373 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 DLGAP4Q9Y2H0 992 aa7.81□□□□□ -1.16
SCRN1-208ENST00000438497 DPPA5A6NC42 116 aa7.8□□□□□ -1.16
SCRN1-208ENST00000438497 EMC8O43402 210 aa7.8□□□□□ -1.16
SCRN1-208ENST00000438497 ICOSLGO75144 302 aa7.8□□□□□ -1.16
SCRN1-208ENST00000438497 FTCDO95954 541 aa7.8□□□□□ -1.16
SCRN1-208ENST00000438497 CGAP01215 116 aa7.8□□□□□ -1.16
SCRN1-208ENST00000438497 IGHV4-39P01824 125 aa7.8□□□□□ -1.16
SCRN1-208ENST00000438497 ALOX15P16050 662 aaPredicted RBP7.8□□□□□ -1.16
SCRN1-208ENST00000438497 PPP3CBP16298 524 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms