RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CCND2P30279 289 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZKSCAN8Q15776 578 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 EMBQ6PCB8 327 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 DPY19L2P2Q6ZN68 376 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 SYVN1Q86TM6 617 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 LUZP1Q86V48 1076 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 AMZ2Q86W34 360 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 GPBP1Q86WP2 473 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 CCDC71Q8IV32 467 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 FAM71CQ8NEG0 241 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 DQX1Q8TE96 717 aaKnown RBP2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 RAB3CQ96E17 227 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 C1orf147Q96MC9 270 aaPredicted RBP2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 HSD17B14Q9BPX1 270 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 NDUFAF3Q9BU61 184 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 NMNAT2Q9BZQ4 307 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 DPH5Q9H2P9 285 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 ACTR8Q9H981 624 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 NRN1Q9NPD7 142 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 RPS10P5Q9NQ39 176 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 TUBGCP4Q9UGJ1 667 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 MRPL11Q9Y3B7 192 aaKnown RBP2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 CPQQ9Y646 472 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 FKBP7Q9Y680 259 aa2.9□□□□□ -1.95
TRAPPC13-204ENST00000438419 SALL1Q9NSC2 1324 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 TEX48A0A1B0GUV7 120 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 K7EPI3 171 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 SMPD2O60906 423 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 MT-ND1P03886 318 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 HCKP08631 526 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 TSPAN8P19075 237 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 NOP14P78316 857 aaKnown RBP2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 GSTO1P78417 241 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 PRKCEQ02156 737 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 FUT7Q11130 342 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 DPYSQ14117 519 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNF239Q16600 458 aaKnown RBP2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 HAGHQ16775 308 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 VWA2Q5GFL6 755 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNF506Q5JVG8 444 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 SEL1L3Q68CR1 1132 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNF774Q6NX45 483 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 GOLGA7Q7Z5G4 137 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 GPR142Q7Z601 462 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 FGFRL1Q8N441 504 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 SAMD12Q8N8I0 201 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 MINDY2Q8NBR6 621 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZBTB44Q8NCP5 570 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNRF1Q8ND25 227 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 ZNF397Q8NF99 534 aaPredicted RBP2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 OR52B4Q8NGK2 314 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 OR4Q3Q8NH05 313 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 PTPRUQ92729 1446 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 CAPNS2Q96L46 248 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 APOOQ9BUR5 198 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 LIN28AQ9H9Z2 209 aaKnown RBP2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 Q9HAA7 133 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 IL1RL2Q9HB29 575 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 ELL3Q9HB65 397 aaPredicted RBP2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 GDAP2Q9NXN4 497 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 ANKMY1Q9P2S6 941 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 SEC14L4Q9UDX3 406 aa2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 KLF2Q9Y5W3 355 aaPredicted RBP2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.89□□□□□ -1.95
TRAPPC13-204ENST00000438419 A0A0J9YVX5 310 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 RPL37AP8A6NKH3 93 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 RNF212BA8MTL3 300 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 SRRM5B3KS81 715 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 H3BMH7 237 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 CYB561D2O14569 222 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 EI24O14681 340 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 BCL2L11O43521 198 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 GPRIN2O60269 458 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 DIRAS3O95661 229 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 GUCA1CO95843 209 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 RENP00797 406 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 RRASP10301 218 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 NCF1P14598 390 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 GP9P14770 177 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 FOSL2P15408 326 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 PAICSP22234 425 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 MAT2AP31153 395 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 SLC7A2P52569 658 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 RFTN1Q14699 578 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 PARP6Q2NL67 630 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 TMEM44Q2T9K0 475 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 C15orf32Q32M92 178 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 REP15Q6BDI9 236 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 RHBDD2Q6NTF9 364 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 ERASQ7Z444 233 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 P4HA3Q7Z4N8 544 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 MARCH9Q86YJ5 346 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 CENPSQ8N2Z9 138 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 BCORP1Q8N888 145 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 WDR36Q8NI36 951 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 NCLNQ969V3 563 aa2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 PNNQ9H307 717 aaKnown RBP2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 RNF41Q9H4P4 317 aaPredicted RBP2.88□□□□□ -1.95
TRAPPC13-204ENST00000438419 ALG9Q9H6U8 611 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms