RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 OR6T1Q8NGN1 323 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 DYNC2LI1Q8TCX1 351 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 TRUB1Q8WWH5 349 aaKnown RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 CNDP2Q96KP4 475 aaKnown RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 ZNF347Q96SE7 839 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 KCNS3Q9BQ31 491 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 MRPS30Q9NP92 439 aaKnown RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 SACM1LQ9NTJ5 587 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 GIN1Q9NXP7 522 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 ERGIC3Q9Y282 383 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 NCKAP1Q9Y2A7 1128 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 SLC17A4Q9Y2C5 497 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 CARD8Q9Y2G2 431 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 PCDHGB1Q9Y5G3 927 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 DMXL1Q9Y485 3027 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 BTN3A3O00478 584 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 TLX2O43763 284 aaPredicted RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 EIF2S1P05198 315 aaKnown RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 ADORA3P0DMS8 318 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 DRD1P21728 446 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 CRISP1P54107 249 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 PCBP4P57723 403 aaKnown RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 CXCR4P61073 352 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 RPA4Q13156 261 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 C6orf132Q5T0Z8 1188 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 KIAA1161Q6NSJ0 714 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 SHFQ7M4L6 423 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 NUDT13Q86X67 352 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 ACOT4Q8N9L9 421 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 MCFD2Q8NI22 146 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 HTRA1Q92743 480 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 UBE2E3Q969T4 207 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 TBC1D20Q96BZ9 403 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 VMP1Q96GC9 406 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 METTL2AQ96IZ6 378 aaKnown RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 ITPAQ9BY32 194 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 SLIRPQ9GZT3 109 aaKnown RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 C8orf33Q9H7E9 229 aaPredicted RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 GPR55Q9Y2T6 319 aaPredicted RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 ARID1BQ8NFD5 2236 aaPredicted RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 FAM170BA6NMN3 283 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 ZW10O43264 779 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 CYP7B1O75881 506 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 SULT1C4O75897 302 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 CDK1P06493 297 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 CELA2BP08218 269 aaPredicted RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 CHRNB1P11230 501 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 RCVRNP35243 200 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 MAPK9P45984 424 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 BTN3A2P78410 334 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 MXD1Q05195 221 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 C1orf61Q13536 156 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 TSTQ16762 297 aaKnown RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 DGUOKQ16854 277 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 SLC34A3Q8N130 599 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 OR10G6Q8NH81 332 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 WDR36Q8NI36 951 aaKnown RBP8.92□□□□□ -0.98
CUX1-206ENST00000437600 ZCCHC10Q8TBK6 192 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 CREB3L4Q8TEY5 395 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 NEURL3Q96EH8 262 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 AMDHD1Q96NU7 426 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 PITX2Q99697 317 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 GABARAPL3Q9BY60 117 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 NDEL1Q9GZM8 345 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 SLC6A20Q9NP91 592 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 MKLN1Q9UL63 735 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 ICKQ9UPZ9 632 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 ASXL3Q9C0F0 2248 aa8.92□□□□□ -0.98
CUX1-206ENST00000437600 TBX1O43435 398 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 EPPINO95925 133 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 ITGA2P17301 1181 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 GABRB1P18505 474 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 RHCEP18577 417 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 PEBP1P30086 187 aaKnown RBP8.91□□□□□ -0.98
CUX1-206ENST00000437600 RFX3P48380 749 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 RAB28P51157 221 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 RBBP4Q09028 425 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 RPE65Q16518 533 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 DCST1Q5T197 706 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 C10orf62Q5T681 223 aaPredicted RBP8.91□□□□□ -0.98
CUX1-206ENST00000437600 SAXO2Q658L1 398 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 OR9A2Q8NGT5 310 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 OR5P2Q8WZ92 322 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 BTBD2Q9BX70 525 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 POLR2J3Q9H1A7 115 aaKnown RBP8.91□□□□□ -0.98
CUX1-206ENST00000437600 SLC35C2Q9NQQ7 365 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 ACSL5Q9ULC5 683 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 POFUT2Q9Y2G5 429 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 CTDSP2O14595 271 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 AQP9O43315 295 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 RPN2P04844 631 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 CHRM4P08173 479 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 GLULP15104 373 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 CBLP22681 906 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 ELAVL4P26378 380 aaKnown RBP8.91□□□□□ -0.98
CUX1-206ENST00000437600 MC3RP41968 323 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 AVPR1BP47901 424 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 PCYT1AP49585 367 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 HYAL2Q12891 473 aa8.91□□□□□ -0.98
CUX1-206ENST00000437600 SLC9A5Q14940 896 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms