RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 THEM5Q8N1Q8 247 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 SIDT2Q8NBJ9 832 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 OR6F1Q8NGZ6 308 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 SPPL2AQ8TCT8 520 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 C11orf52Q96A22 123 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 CABS1Q96KC9 395 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 S1PR3Q99500 378 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 SDHCQ99643 169 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 SSX3Q99909 188 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 DDX50Q9BQ39 737 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 RBM24Q9BX46 236 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 NUSAP1Q9BXS6 441 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 OCR1Q9BZK8 76 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 MTIF3Q9H2K0 278 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 PDFQ9HBH1 243 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 C3orf14Q9HBI5 128 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 MRPS18CQ9Y3D5 142 aaKnown RBP2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 TRPM7Q96QT4 1865 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 KDM3BQ7LBC6 1761 aa2.28□□□□□ -2.04
HMGB1P31-201ENST00000437242 ANKRD26Q9UPS8 1709 aa2.28□□□□□ -2.05
HMGB1P31-201ENST00000437242 NSD3Q9BZ95 1437 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 CCDC7Q96M83 1385 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 TTC21BQ7Z4L5 1316 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 SZT2Q5T011 3432 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 KIF20BQ96Q89 1820 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 IGHV3-38A0A0C4DH36 116 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 ATP6AP2A0A1C7CYW4 349 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 SMIM30A4D0T7 59 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 SLC15A5A6NIM6 579 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 RTCAO00442 366 aaKnown RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 CDX4O14627 284 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 INPP4BO15327 924 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 SIGLEC5O15389 551 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 ECE2O60344 883 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 CSDE1O75534 798 aaKnown RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 SERPINF2P08697 491 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 CT45A8P0DMV1 189 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 CT45A9P0DMV2 189 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 ODC1P11926 461 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 SKILP12757 684 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 FERP16591 822 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 FCGR2BP31994 310 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 FCGR2CP31995 323 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 RPL9P32969 192 aaKnown RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 ALDH3B1P43353 468 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 TNFSF10P50591 281 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 NDUFV3P56181 108 aaKnown RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 NME5P56597 212 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 ABCE1P61221 599 aaKnown RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 ACTN3Q08043 901 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 C17orf67Q0P5P2 114 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 HSPA14Q0VDF9 509 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 TSTA3Q13630 321 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 KIAA0141Q14154 515 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 STX1AQ16623 288 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 CT45A2Q5DJT8 189 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 LYPLAL1Q5VWZ2 237 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 C4orf32Q8N8J7 132 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 GOLGA5Q8TBA6 731 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 SPATA18Q8TC71 538 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 SMPDL3AQ92484 453 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 KRT35Q92764 455 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 HAS2Q92819 552 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 ATP6V0A1Q93050 837 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 ATP6V0BQ99437 205 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 FAM213AQ9BRX8 229 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 TMEM245Q9H330 911 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 MARCH7Q9H992 704 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 DNAJC11Q9NVH1 559 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 CWC25Q9NXE8 425 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 CYP39A1Q9NYL5 469 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 PLEK2Q9NYT0 353 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 HMG20BQ9P0W2 317 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 PILRAQ9UKJ1 303 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 KNSTRNQ9Y448 316 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 BCORQ6W2J9 1755 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 PAPPA2Q9BXP8 1791 aa2.27□□□□□ -2.05
HMGB1P31-201ENST00000437242 PDE4DIPQ5VU43 2346 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 ZSWIM8A7E2V4 1837 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 KDRP35968 1356 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 EIF3AQ14152 1382 aaKnown RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 SCN7AQ01118 1682 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 TRBV2A0A0J9YWF9 115 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 A0A1W2PQ72 361 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 FAM168BA1KXE4 195 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 BCLAF3A2AJT9 711 aaKnown RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 TRIM64A6NGJ6 449 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 TRIM64BA6NI03 449 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 PDHXO00330 501 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 KERAO60938 352 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 OLFM2O95897 454 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 OR1D2P34982 312 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 FHITP49789 147 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 UCP2P55851 309 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 BACE1P56817 501 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 EVCP57679 992 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 KCNK10P57789 538 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 LASP1Q14847 261 aaKnown RBP2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 SPHARQ15513 63 aa2.26□□□□□ -2.05
HMGB1P31-201ENST00000437242 MLF2Q15773 248 aaPredicted RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms