RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	DDA1	Q9BW61	102 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CDADC1	Q9BWV3	514 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	BTBD2	Q9BX70	525 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ELOVL6	Q9H5J4	265 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PFDN4	Q9NQP4	134 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ACSS2	Q9NR19	701 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	THSD1	Q9NS62	852 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	INTS9	Q9NV88	658 aa	Known RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SIDT1	Q9NXL6	827 aa	Known RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KLHL9	Q9P2J3	617 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	STX18	Q9P2W9	335 aa	Known RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NDOR1	Q9UHB4	597 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZFP69B	Q9UJL9	534 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KLK13	Q9UKR3	277 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SRPK3	Q9UPE1	567 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SH2B3	Q9UQQ2	575 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GOLGA4	Q13439	2230 aa	Known RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RP1	P56715	2156 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638		A0A0C4DFX4	3053 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	EP300	Q09472	2414 aa	Predicted RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	UNC13C	Q8NB66	2214 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KCNE1B	A0A087WTH5	132 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638		A0A088AWK7	358 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LOC105369274	A0A096LPK9	316 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LOC102723532	A0A0G2JNH3	316 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TMEM82	A0PJX8	343 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	HYKK	A2RU49	373 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DBX1	A6NMT0	343 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NOTO	A8MTQ0	251 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638		H0YAE9	185 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	UBE2C	O00762	179 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR7A17	O14581	309 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FFAR3	O14843	346 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SHOX	O15266	292 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GPR42	O15529	346 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NDUFS4	O43181	175 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF749	O43361	778 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GATC	O43716	136 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LCMT2	O60294	686 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SCAF4	O95104	1147 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ESRRB	O95718	433 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PNP	P00491	289 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PIM1	P11309	404 aa	Predicted RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	EPOR	P19235	508 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CD247	P20963	164 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF10	P21506	573 aa	Predicted RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	AGXT	P21549	392 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	BGN	P21810	368 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CD82	P27701	267 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	BCL6	P41182	706 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	AVPR1B	P47901	424 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SLC1A6	P48664	564 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RAP1GDS1	P52306	607 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CASP6	P55212	293 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ABCE1	P61221	599 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RPP30	P78346	268 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TRAF3	Q13114	568 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RTP5	Q14D33	572 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	IMPG1	Q17R60	797 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SMU1	Q2TAY7	513 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GGTA1P	Q4G0N0	100 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SGO1	Q5FBB7	561 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MANEA	Q5SRI9	462 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DEPDC1	Q5TB30	811 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GARNL3	Q5VVW2	1013 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CES4A	Q5XG92	561 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FRMPD2B	Q6IN97	320 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NIPAL1	Q6NVV3	410 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZCCHC23	Q6ZST2	131 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FRMD7	Q6ZUT3	714 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RPS27L	Q71UM5	84 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ABHD13	Q7L211	337 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MTDH	Q86UE4	582 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CUZD1	Q86UP6	607 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TPRA1	Q86W33	373 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PTRH1	Q86Y79	214 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR4N4	Q8N0Y3	316 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SLC43A2	Q8N370	569 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CDYL2	Q8N8U2	506 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	BMPER	Q8N8U9	685 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	L3MBTL4	Q8NA19	623 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF740	Q8NDX6	193 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SRFBP1	Q8NEF9	429 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR52B6	Q8NGF0	335 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR1L3	Q8NH93	324 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZCCHC10	Q8TBK6	192 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	RAB3IL1	Q8TBN0	382 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	POC1B	Q8TC44	478 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	METTL6	Q8TCB7	284 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LRRC8C	Q8TDW0	803 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ADAMTS15	Q8TE58	950 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF566	Q969W8	418 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MTFMT	Q96DP5	389 aa	Known RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MOCOS	Q96EN8	888 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CMTM7	Q96FZ5	175 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PRR11	Q96HE9	360 aa	Predicted RBP	5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MAP6	Q96JE9	813 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FAR2	Q96K12	515 aa		5.82	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF578	Q96N58	590 aa	Predicted RBP	5.82	□□□□□ -1.48

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