RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 H0Y9J4 135 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 CCSO14618 274 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 DUSP11O75319 330 aaKnown RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 OR6A2O95222 327 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 SMC2O95347 1197 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 PDGFBP01127 241 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 ASGR1P07306 291 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 GIG44P09565 113 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 ZNF24P17028 368 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ARF4P18085 180 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 PPP2R1BP30154 601 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 EPS15P42566 896 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 OR1G1P47890 313 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 NT5C2P49902 561 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 METAP1P53582 386 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ATXN3P54252 364 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 KRTAP10-8P60410 259 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ACTR1AP61163 376 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 GABPB1Q06547 395 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 MORF4L2Q15014 288 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 PDK1Q15118 436 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 STK11Q15831 433 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 CLPPQ16740 277 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 AARDQ4LEZ3 155 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 Q6ZVH6 145 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 MTERF4Q7Z6M4 381 aaKnown RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 UNC5CLQ8IV45 518 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 KRT222Q8N1A0 295 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 TRIML2Q8N7C3 387 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 FAM133AQ8N9E0 248 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 DENND6BQ8NEG7 585 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 UBLCP1Q8WVY7 318 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 GTSF1Q8WW33 167 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 SLC5A11Q8WWX8 675 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 DTNBP1Q96EV8 351 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 C8orf76Q96K31 380 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 TTC25Q96NG3 672 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ERGIC2Q96RQ1 377 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 TXN2Q99757 166 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 SH3GL1Q99961 368 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 BCL7BQ9BQE9 202 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 MLPHQ9BV36 600 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 GCOM2Q9BZD3 368 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 AMBNQ9NP70 447 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ZNF275Q9NSD4 429 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 EXTL2Q9UBQ6 330 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 IL19Q9UHD0 177 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 AURKCQ9UQB9 309 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 CLCA3PQ9Y6N3 262 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 A0A0A6YYC8 382 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 CTAGE15A4D2H0 777 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 C5orf51A6NDU8 294 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 LRRIQ4A6NIV6 560 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 GPR89AB7ZAQ6 455 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 I3L1I5 382 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 ZNF263O14978 683 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 RNF113AO15541 343 aaKnown RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 NOL3O60936 208 aaKnown RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 PNPP00491 289 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 TPM1P09493 284 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 GPR89BP0CG08 455 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 HSD17B1P14061 328 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 GPX3P22352 226 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 GJB2P29033 226 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 CCND3P30281 292 aaPredicted RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 PITPNBP48739 271 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 FNTAP49354 379 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 HLCSP50747 726 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 HADHBP55084 474 aaKnown RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 NME5P56597 212 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 SCN1BQ07699 218 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 NPRL3Q12980 569 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 SNX1Q13596 522 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 CAPRIN1Q14444 709 aaKnown RBP2.41□□□□□ -2.02
CLK1-204ENST00000432425 SLC17A1Q14916 467 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 TRADDQ15628 312 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ZSCAN26Q16670 478 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 C17orf58Q2M2W7 97 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 CCDC40Q4G0X9 1142 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ANKRD20A4Q4UJ75 823 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ANKRD20A8PQ5CZ79 823 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ANKRD20A2Q5SQ80 823 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ANKRD20A1Q5TYW2 823 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 C12orf60Q5U649 245 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 ANKRD20A3Q5VUR7 823 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 AADACL4Q5VUY2 407 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 CTAGE6Q86UF2 777 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 CDH26Q8IXH8 852 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 KLHL7Q8IXQ5 586 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 SIX6OS1Q8N1H7 587 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 HDDC3Q8N4P3 179 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 CCDC197Q8NCU1 140 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 TBCKQ8TEA7 893 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 SAP25Q8TEE9 199 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 GANCQ8TET4 914 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 RAPGEF5Q92565 580 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 RAB7BQ96AH8 199 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 NRBF2Q96F24 287 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 SIGLEC12Q96PQ1 595 aa2.41□□□□□ -2.02
CLK1-204ENST00000432425 DPEP3Q9H4B8 488 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms