RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 SLC52A3Q9NQ40 469 aa9.34□□□□□ -0.91
ATG4B-212ENST00000430617 ENAMQ9NRM1 1142 aa9.34□□□□□ -0.91
ATG4B-212ENST00000430617 TAGLN3Q9UI15 199 aa9.34□□□□□ -0.91
ATG4B-212ENST00000430617 EIF3LQ9Y262 564 aaKnown RBP9.34□□□□□ -0.91
ATG4B-212ENST00000430617 ABCA1O95477 2261 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 LOC105369274A0A096LPK9 316 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 A0A0A6YYD5 115 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 IGHV3-20A0A0C4DH32 117 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 LOC102723532A0A0G2JNH3 316 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 A0A0J9YVX5 310 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 FITM1A5D6W6 292 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 C9JVG2 144 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 SAP18O00422 153 aaKnown RBP9.33□□□□□ -0.92
ATG4B-212ENST00000430617 SH3BGRLO75368 114 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 SCELO95171 688 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 STATHP02808 62 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 COX4I1P13073 169 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 CD46P15529 392 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 CALB2P22676 271 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 TPP2P29144 1249 aaPredicted RBP9.33□□□□□ -0.92
ATG4B-212ENST00000430617 BSGP35613 385 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 UFM1P61960 85 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 ZNF763Q0D2J5 394 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 PWP1Q13610 501 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 MAPRE2Q15555 327 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 TMEM35AQ53FP2 167 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 TOR1AIP1Q5JTV8 583 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 ZNF793Q6ZN11 406 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 ZNF771Q7L3S4 317 aaPredicted RBP9.33□□□□□ -0.92
ATG4B-212ENST00000430617 NUDT13Q86X67 352 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 RIMKLAQ8IXN7 391 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 OR4N4Q8N0Y3 316 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 POU5F2Q8N7G0 328 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 TMEM178AQ8NBL3 297 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 OR2L5Q8NG80 312 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.33□□□□□ -0.92
ATG4B-212ENST00000430617 GAL3ST3Q96A11 431 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 SLC7A6OSQ96CW6 309 aaPredicted RBP9.33□□□□□ -0.92
ATG4B-212ENST00000430617 Q96MF0 132 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 F2RL3Q96RI0 385 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 UTP23Q9BRU9 249 aaKnown RBP9.33□□□□□ -0.92
ATG4B-212ENST00000430617 SORBS1Q9BX66 1292 aaKnown RBP9.33□□□□□ -0.92
ATG4B-212ENST00000430617 TP63Q9H3D4 680 aaPredicted RBP9.33□□□□□ -0.92
ATG4B-212ENST00000430617 KLHL31Q9H511 634 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 MYNNQ9NPC7 610 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 NMRK1Q9NWW6 199 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 TEKT2Q9UIF3 430 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 MCM8Q9UJA3 840 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 ADAM29Q9UKF5 820 aa9.33□□□□□ -0.92
ATG4B-212ENST00000430617 RAI1Q7Z5J4 1906 aaPredicted RBP9.33□□□□□ -0.92
ATG4B-212ENST00000430617 A0A0G2JNJ9 132 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 HYKKA2RU49 373 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 FAM234BA2RU67 622 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 TRIM64A6NGJ6 449 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 TRIM64BA6NI03 449 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 H0YGG7 62 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 RTCAO00442 366 aaKnown RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 NR5A2O00482 541 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 FBP2O00757 339 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 CDC40O60508 579 aaKnown RBP eCLIP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 PRMT3O60678 531 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 HNRNPCL1O60812 293 aaKnown RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 EEDO75530 441 aaKnown RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 SEC24DO94855 1032 aaPredicted RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 SLC35G6P0C7Q6 338 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 SMIM10L1P0DMW3 83 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 ICAM2P13598 275 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 PCSK2P16519 638 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 RFC3P40938 356 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 CPA2P48052 419 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 NME5P56597 212 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 CLDN8P56748 225 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 ARF3P61204 181 aaPredicted RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 STXBP1P61764 594 aaKnown RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 RGS1Q08116 209 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 PDE7AQ13946 482 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 MAPKAPK3Q16644 382 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 PRTGQ2VWP7 1150 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 AGKQ53H12 422 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 CMPK2Q5EBM0 449 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 WASHC2DQ5SRD0 308 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 ZNF468Q5VIY5 522 aaPredicted RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 YOD1Q5VVQ6 348 aaPredicted RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 SLC25A25Q6KCM7 469 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 TMEM214Q6NUQ4 689 aaKnown RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 ABHD17CQ6PCB6 329 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 TMEM205Q6UW68 189 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 FAM9CQ8IZT9 166 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 TTC29Q8NA56 475 aaPredicted RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 CLHC1Q8NHS4 586 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 RP9Q8TA86 221 aaKnown RBP9.32□□□□□ -0.92
ATG4B-212ENST00000430617 SLC13A3Q8WWT9 602 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 TMEM158Q8WZ71 300 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 TMEM125Q96AQ2 219 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 TESCQ96BS2 214 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 CMTM5Q96DZ9 223 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 SMIM10Q96HG1 83 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 NSL1Q96IY1 281 aa9.32□□□□□ -0.92
ATG4B-212ENST00000430617 ZNF354BQ96LW1 612 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms