RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 TRIM4Q9C037 500 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 NXF5Q9H1B4 397 aaKnown RBP23.23■■□□□ 1.31
CPNE1-212ENST00000430570 FOLH1BQ9HBA9 442 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 DDX18Q9NVP1 670 aaKnown RBP23.23■■□□□ 1.31
CPNE1-212ENST00000430570 ZIM2Q9NZV7 527 aa23.23■■□□□ 1.31
CPNE1-212ENST00000430570 NUP214P35658 2090 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-212ENST00000430570 SLC22A3O75751 556 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 PSMG1O95456 288 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 IFI6P09912 130 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 TROVE2P10155 538 aaKnown RBP eCLIP23.22■■□□□ 1.31
CPNE1-212ENST00000430570 S100A3P33764 101 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 ZNF169Q14929 603 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-212ENST00000430570 NNATQ16517 81 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 IL20RBQ6UXL0 311 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 ANKRD46Q86W74 232 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 MIER2Q8N344 545 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 VSTM2LQ96N03 204 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 CXorf36Q9H7Y0 433 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 FAM53CQ9NYF3 392 aa23.22■■□□□ 1.31
CPNE1-212ENST00000430570 COL6A6A6NMZ7 2263 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 RNASET2O00584 256 aaKnown RBP23.21■■□□□ 1.31
CPNE1-212ENST00000430570 CDK2AP1O14519 115 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 ABCB1P08183 1280 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-212ENST00000430570 CASRP41180 1078 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 HBA1P69905 142 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 DPY19L1Q2PZI1 675 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 WDR53Q7Z5U6 358 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-212ENST00000430570 NUP43Q8NFH3 380 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 PSMA8Q8TAA3 256 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 SLC22A8Q8TCC7 542 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 LCORQ96JN0 433 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-212ENST00000430570 RILPQ96NA2 401 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 ZBTB18Q99592 522 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 TAS2R9Q9NYW1 312 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 NTMQ9P121 344 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 ANAPC2Q9UJX6 822 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 GPR55Q9Y2T6 319 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-212ENST00000430570 COPG1Q9Y678 874 aaKnown RBP23.21■■□□□ 1.31
CPNE1-212ENST00000430570 BOD1L1Q8NFC6 3051 aa23.21■■□□□ 1.31
CPNE1-212ENST00000430570 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 TRAV17A0A0B4J275 112 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 A8MVJ9 347 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 CFLARO15519 480 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 COQ9O75208 318 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 SORBS2O94875 1100 aaKnown RBP23.2■■□□□ 1.3
CPNE1-212ENST00000430570 PPICP45877 212 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 MRPL19P49406 292 aaKnown RBP23.2■■□□□ 1.3
CPNE1-212ENST00000430570 SEC24CP53992 1094 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 PRKAG1P54619 331 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 CORO7P57737 925 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 OPN5Q6U736 354 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 NPSR1Q6W5P4 371 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 MDGA2Q7Z553 956 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 PRR22Q8IZ63 422 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 SLC15A4Q8N697 577 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 GLB1L3Q8NCI6 653 aaPredicted RBP23.2■■□□□ 1.3
CPNE1-212ENST00000430570 C17orf47Q8NEP4 570 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 FAM120BQ96EK7 910 aaKnown RBP23.2■■□□□ 1.3
CPNE1-212ENST00000430570 GIMAP5Q96F15 307 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 HPF1Q9NWY4 346 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 SNX8Q9Y5X2 465 aa23.2■■□□□ 1.3
CPNE1-212ENST00000430570 SMG1Q96Q15 3661 aaKnown RBP23.19■■□□□ 1.3
CPNE1-212ENST00000430570 PRSS51A0A1B0GVH4 220 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 B8ZZF3 427 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 EMC8O43402 210 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 SUV39H1O43463 412 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 ERN1O75460 977 aaKnown RBP23.19■■□□□ 1.3
CPNE1-212ENST00000430570 CPSF4O95639 269 aaKnown RBP23.19■■□□□ 1.3
CPNE1-212ENST00000430570 PGRP06401 933 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 CT45A8P0DMV1 189 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 CT45A9P0DMV2 189 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 CD1EP15812 388 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 DRD5P21918 477 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 ARFIP2P53365 341 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 PSG6Q00889 435 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 ZNF155Q12901 538 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-212ENST00000430570 ZNF791Q3KP31 576 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-212ENST00000430570 CT45A2Q5DJT8 189 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 ZNF766Q5HY98 468 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 ANXA8L1Q5VT79 327 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 TAGAPQ8N103 731 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 CYP4Z2PQ8N1L4 340 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 CHMP6Q96FZ7 201 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 SCMH1Q96GD3 660 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 C3orf14Q9HBI5 128 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 EQTNQ9NQ60 294 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 KLHL1Q9NR64 748 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 PCDHGA10Q9Y5H3 936 aa23.19■■□□□ 1.3
CPNE1-212ENST00000430570 SP1P08047 785 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 NCF2P19878 526 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-212ENST00000430570 STX1BP61266 288 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 DCAF7P61962 342 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 SLC25A25Q6KCM7 469 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 SZRD1Q7Z422 152 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 FUNDC1Q8IVP5 155 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 CLEC4FQ8N1N0 589 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 C16orf58Q96GQ5 468 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 BTBD9Q96Q07 612 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 OR52E6Q96RD3 313 aa23.18■■□□□ 1.3
CPNE1-212ENST00000430570 FAM120CQ9NX05 1096 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms