RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 CLPXO76031 633 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
PTCH1-207ENST00000429896 HIST1H1TP22492 207 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-207ENST00000429896 GGTA1PQ4G0N0 100 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 IDNKQ5T6J7 187 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 RAB11FIP2Q7L804 512 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 DUSP15Q9H1R2 295 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-207ENST00000429896 LOXL2Q9Y4K0 774 aa12.23□□□□□ -0.45
PTCH1-207ENST00000429896 TIMM8BQ9Y5J9 83 aaPredicted RBP12.23□□□□□ -0.45
PTCH1-207ENST00000429896 GADD45GO95257 159 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 GPR3P46089 330 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 RAB38P57729 211 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 CCSMST1Q4G0I0 132 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 ZBTB8BQ8NAP8 495 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-207ENST00000429896 AP3S1Q92572 193 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 UCKL1Q9NWZ5 548 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 EMCNQ9ULC0 261 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 ZSWIM8A7E2V4 1837 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 LINGO3P0C6S8 592 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 MSX1P28360 303 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 FOXA1P55317 472 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 REEP3Q6NUK4 255 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 C6orf15Q6UXA7 325 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-207ENST00000429896 ESX1Q8N693 406 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 OR2AJ1Q8NGZ0 328 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 GUCD1Q96NT3 240 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 OSBPL11Q9BXB4 747 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 GRIP1Q9Y3R0 1128 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 TDRD15B5MCY1 1934 aaKnown RBP12.22□□□□□ -0.45
PTCH1-207ENST00000429896 NSG1A0A0A6YYJ2 146 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 ACOT7O00154 380 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 FOXE1O00358 373 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-207ENST00000429896 NME6O75414 186 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-207ENST00000429896 OPN1SWP03999 348 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 ZDHHC21Q8IVQ6 265 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 GEMIN6Q8WXD5 167 aaKnown RBP12.22□□□□□ -0.45
PTCH1-207ENST00000429896 TM9SF4Q92544 642 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 DIRAS2Q96HU8 199 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 SLC23A2Q9UGH3 650 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 LIPT1Q9Y234 373 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 C2orf92A0A1B0GVN3 265 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 A0A1W2PQF6 199 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 CD160O95971 181 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 PGAM2P15259 253 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 CKMT2P17540 419 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 CAPZA1P52907 286 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 ARG2P78540 354 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 GARNL3Q5VVW2 1013 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 TMPRSS11AQ6ZMR5 421 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 SLCO4C1Q6ZQN7 724 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 LRTOMTQ8WZ04 291 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 TBC1D20Q96BZ9 403 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 CCDC120Q96HB5 630 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 SH3YL1Q96HL8 342 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-207ENST00000429896 DMRTB1Q96MA1 342 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 IFT27Q9BW83 186 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 C14orf105Q9NVL8 296 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 PADI1Q9ULC6 663 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 ICKQ9UPZ9 632 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 COMMD3-BMI1R4GMX3 469 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 ACPPP15309 386 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 RPL5P46777 297 aaKnown RBP12.22□□□□□ -0.45
PTCH1-207ENST00000429896 TSPAN5P62079 268 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 MSANTD1Q6ZTZ1 278 aa12.22□□□□□ -0.45
PTCH1-207ENST00000429896 ZBTB20Q9HC78 741 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-207ENST00000429896 KRBA1A5PL33 1030 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 ZSCAN5BA6NJL1 495 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 EPHA8P29322 1005 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-207ENST00000429896 GMFBP60983 142 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 FOXC1Q12948 553 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 KIAA1614Q5VZ46 1190 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 C6orf120Q7Z4R8 191 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 MCFD2Q8NI22 146 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 METTL2AQ96IZ6 378 aaKnown RBP12.21□□□□□ -0.45
PTCH1-207ENST00000429896 ACPTQ9BZG2 426 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 TCEAL2Q9H3H9 227 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-207ENST00000429896 SMOC1Q9H4F8 434 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 MYNNQ9NPC7 610 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 ADAM29Q9UKF5 820 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 FAM227AF5H4B4 570 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 E2F3O00716 465 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 ZNF749O43361 778 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 AKAP8O43823 692 aaKnown RBP12.21□□□□□ -0.45
PTCH1-207ENST00000429896 RPP14O95059 124 aaKnown RBP12.21□□□□□ -0.45
PTCH1-207ENST00000429896 MAT1AQ00266 395 aaKnown RBP12.21□□□□□ -0.45
PTCH1-207ENST00000429896 GIPC3Q8TF64 312 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 CLK4Q9HAZ1 481 aaKnown RBP12.21□□□□□ -0.45
PTCH1-207ENST00000429896 TARM1B6A8C7 271 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 RETP07949 1114 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 RRADP55042 308 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 PPP3R1P63098 170 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 LARP4Q71RC2 724 aaKnown RBP eCLIP12.21□□□□□ -0.45
PTCH1-207ENST00000429896 CLEC14AQ86T13 490 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 DEFB124Q8NES8 71 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 TMEM234Q8WY98 164 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 DIO2Q92813 273 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 CCDC74BQ96LY2 380 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 SLC39A3Q9BRY0 314 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 TVP23BQ9NYZ1 205 aa12.21□□□□□ -0.45
PTCH1-207ENST00000429896 C5AR2Q9P296 337 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms