RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 AP1ARQ63HQ0 302 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 SLC30A6Q6NXT4 461 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 XKRXQ6PP77 449 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 GFRALQ6UXV0 394 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 DGAT2L6Q6ZPD8 337 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 MDGA2Q7Z553 956 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.42□□□□□ -1.06
SMC1A-203ENST00000428014 NUDCD3Q8IVD9 361 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 CHERPQ8IWX8 916 aaKnown RBP8.42□□□□□ -1.06
SMC1A-203ENST00000428014 TRIM42Q8IWZ5 723 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 ZNF808Q8N4W9 903 aaPredicted RBP8.42□□□□□ -1.06
SMC1A-203ENST00000428014 OR2M7Q8NG81 312 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 ZFP28Q8NHY6 868 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 OIT3Q8WWZ8 545 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 PPWD1Q96BP3 646 aaKnown RBP8.42□□□□□ -1.06
SMC1A-203ENST00000428014 ZBED6CLQ96FA7 236 aaPredicted RBP8.42□□□□□ -1.06
SMC1A-203ENST00000428014 TMEM41AQ96HV5 264 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 VSTM2LQ96N03 204 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 ANGPTL4Q9BY76 406 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 ZFP64Q9NPA5 681 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 MIEF1Q9NQG6 463 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 LUZP4Q9P127 313 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 SLC17A7Q9P2U7 560 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 HEY2Q9UBP5 337 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 SUCOQ9UBS9 1254 aaKnown RBP8.42□□□□□ -1.06
SMC1A-203ENST00000428014 B4GALT7Q9UBV7 327 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 ERRFI1Q9UJM3 462 aaPredicted RBP8.42□□□□□ -1.06
SMC1A-203ENST00000428014 PRDM4Q9UKN5 801 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 RAP2CQ9Y3L5 183 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 MYO7BQ6PIF6 2116 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 PCNX1Q96RV3 2341 aa8.42□□□□□ -1.06
SMC1A-203ENST00000428014 ZNF407Q9C0G0 2248 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 GLOD5A6NK44 160 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 SLCO1B7G3V0H7 640 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 AQP7O14520 342 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 PRRG2O14669 202 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 TFECO14948 347 aaPredicted RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 TRIM3O75382 744 aaPredicted RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 SEC22BO75396 215 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 ERAL1O75616 437 aaKnown RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 PPM1BO75688 479 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 UNC5CO95185 931 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 CT62P0C5K7 136 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 CHN1P15882 459 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 PRPS1L1P21108 318 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 NT5EP21589 574 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 ABCD3P28288 659 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 NTSP30990 170 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 MAP3K8P41279 467 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 PSMD4P55036 377 aaKnown RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 IRX1P78414 480 aaPredicted RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 TXNL4AP83876 142 aaKnown RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 ID2Q02363 134 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 EFR3AQ14156 821 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 DPY19L1Q2PZI1 675 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 EIF2S3LQ2VIR3 472 aaKnown RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 CMPK2Q5EBM0 449 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 NHSL2Q5HYW2 709 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 SPDYAQ5MJ70 313 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 CEP85LQ5SZL2 805 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 TMEM211Q6ICI0 200 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 OGFOD2Q6N063 350 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 IL20RBQ6UXL0 311 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 CPSF7Q8N684 471 aaKnown RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 ZNF321PQ8N8H1 164 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 CEP70Q8NHQ1 597 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 FAM57AQ8TBR7 257 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 SPPL2AQ8TCT8 520 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 TWIST2Q8WVJ9 160 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 STON2Q8WXE9 905 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 TLCD1Q96CP7 247 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 MAGED4Q96JG8 741 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 KCNA7Q96RP8 456 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 PRPF18Q99633 342 aaKnown RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 TUBB1Q9H4B7 451 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 REEP4Q9H6H4 257 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 VIPAS39Q9H9C1 493 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 NEUROD4Q9HD90 331 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 ATAD3AQ9NVI7 634 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 ATP6V1HQ9UI12 483 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 MRTO4Q9UKD2 239 aaKnown RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 CNOT11Q9UKZ1 510 aaKnown RBP8.41□□□□□ -1.06
SMC1A-203ENST00000428014 ABCG2Q9UNQ0 655 aa8.41□□□□□ -1.06
SMC1A-203ENST00000428014 NAV2Q8IVL1 2488 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 HRKO00198 91 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 ZNF354AO60765 605 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-203ENST00000428014 SEMA7AO75326 666 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 PRKRAO75569 313 aaKnown RBP8.4□□□□□ -1.06
SMC1A-203ENST00000428014 NGFRP08138 427 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 ABCB1P08183 1280 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-203ENST00000428014 GUSBP08236 651 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 GABRA1P14867 456 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 SDC1P18827 310 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 SSTR4P31391 388 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 MAGEA8P43361 318 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 SMSP52788 366 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 OCRLQ01968 901 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 EMX2Q04743 252 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 C2orf80Q0P641 193 aa8.4□□□□□ -1.06
SMC1A-203ENST00000428014 LRRC74AQ0VAA2 488 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms