RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SIMC1Q8NDZ2 872 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 ADCY4Q8NFM4 1077 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 OR7A2PQ8NGA2 310 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 ZNF675Q8TD23 568 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 STON2Q8WXE9 905 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 PPCDCQ96CD2 204 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 THOC1Q96FV9 657 aaKnown RBP6.88□□□□□ -1.31
LINC01049-201ENST00000426840 VMP1Q96GC9 406 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 FBXL20Q96IG2 436 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 TEX37Q96LM6 180 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 AMDHD1Q96NU7 426 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 BBC3Q96PG8 261 aaPredicted RBP6.88□□□□□ -1.31
LINC01049-201ENST00000426840 LMF1Q96S06 567 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 DEFB126Q9BYW3 111 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 OR8D2Q9GZM6 311 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 GLIPR2Q9H4G4 154 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 CDCP1Q9H5V8 836 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 FGFR1OP2Q9NVK5 253 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 GPR83Q9NYM4 423 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 SH3BP4Q9P0V3 963 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 PTGFRNQ9P2B2 879 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 G3BP2Q9UN86 482 aaKnown RBP6.88□□□□□ -1.31
LINC01049-201ENST00000426840 ERVK-11Q9UQG0 969 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 ERVK-19Q9WJR5 959 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 PCDHGB7Q9Y5F8 929 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 ZZEF1O43149 2961 aa6.88□□□□□ -1.31
LINC01049-201ENST00000426840 LOC400499M0QZD8 3231 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 TRBV11-1A0A0K0K1C0 115 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 A0A1W2PRB8 838 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 PLOD2O00469 737 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 UBDO15205 165 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 PLOD3O60568 738 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 KLHL41O60662 606 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ZFAND5O76080 213 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 CBX7O95931 251 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 SFTPCP11686 197 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 GPX3P22352 226 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 SSTR4P31391 388 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 RPL3P39023 403 aaKnown RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ZFP36L2P47974 494 aaKnown RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 MRPL19P49406 292 aaKnown RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 WNT3P56703 355 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 MLF1P58340 268 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 RNF4P78317 190 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 MFAP5Q13361 173 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 MLC1Q15049 377 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 GSTA3Q16772 222 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 MEP1AQ16819 746 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 PDCD4Q53EL6 469 aaKnown RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 CRB2Q5IJ48 1285 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ACER2Q5QJU3 275 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 AGAP7PQ5VUJ5 663 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 IGFL3Q6UXB1 125 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 HSDL2Q6YN16 418 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 C16orf47Q6ZP98 133 aaPredicted RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 LINC00696Q6ZRV3 163 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ZNF551Q7Z340 670 aaPredicted RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 RPS19BP1Q86WX3 136 aaKnown RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 FAM9CQ8IZT9 166 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 NATD1Q8N6N6 113 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 OR7G1Q8NGA0 311 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 OR9A2Q8NGT5 310 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 OR8K3Q8NH51 312 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 HAS2Q92819 552 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 KAT2AQ92830 837 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 CIDECQ96AQ7 238 aaPredicted RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 TESCQ96BS2 214 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ELP4Q96EB1 424 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ART5Q96L15 291 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 MARK4Q96L34 752 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ZNF354BQ96LW1 612 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 AGAP4Q96P64 663 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 BBS4Q96RK4 519 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 CNPPD1Q9BV87 410 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 DPY30Q9C005 99 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 BRINP2Q9C0B6 783 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 OR10A5Q9H207 317 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ANKRA2Q9H9E1 313 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 LIN28AQ9H9Z2 209 aaKnown RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 TCF7L2Q9NQB0 619 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ZNF71Q9NQZ8 489 aaPredicted RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 SDR39U1Q9NRG7 319 aaPredicted RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ACSS1Q9NUB1 689 aaPredicted RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 GIMAP4Q9NUV9 329 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 STMN3Q9NZ72 180 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 MAPRE3Q9UPY8 281 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ENTPD4Q9Y227 616 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 TP53TG5Q9Y2B4 290 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 ZNF451Q9Y4E5 1061 aa6.87□□□□□ -1.31
LINC01049-201ENST00000426840 DSPP15924 2871 aaKnown RBP6.87□□□□□ -1.31
LINC01049-201ENST00000426840 A0A087WV62 115 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 OR6C76A6NM76 312 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 E9PBE3 544 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 UPK1AO00322 258 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 POLR3GO15318 223 aaPredicted RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 PDPK1O15530 556 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 ZNF354AO60765 605 aaPredicted RBP6.86□□□□□ -1.31
LINC01049-201ENST00000426840 FBXO24O75426 580 aa6.86□□□□□ -1.31
LINC01049-201ENST00000426840 WDPCPO95876 746 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms