RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 MEMO1Q9Y316 297 aa16.98■□□□□ 0.31
MSH5-207ENST00000425703 MAST4O15021 2626 aa16.98■□□□□ 0.31
MSH5-207ENST00000425703 UNC79Q9P2D8 2635 aa16.98■□□□□ 0.31
MSH5-207ENST00000425703 A0A087WV62 115 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 A0A1B0GVC2 190 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 OR14I1A6ND48 311 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 FRG2CA6NGY1 282 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 FAM166BA8MTA8 275 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 E9PLN8 166 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 LSM1O15116 133 aaKnown RBP16.97■□□□□ 0.31
MSH5-207ENST00000425703 TM9SF1O15321 606 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 SUSD5O60279 629 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 CDC40O60508 579 aaKnown RBP eCLIP16.97■□□□□ 0.31
MSH5-207ENST00000425703 PPM1BO75688 479 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 SNX4O95219 450 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 IFI6P09912 130 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 FBXW4P57775 412 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 CEP85LQ5SZL2 805 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 LRIG3Q6UXM1 1119 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 TMEM64Q6YI46 380 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 EXOC3L1Q86VI1 746 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 ZNF808Q8N4W9 903 aaPredicted RBP16.97■□□□□ 0.31
MSH5-207ENST00000425703 SIMC1Q8NDZ2 872 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 CDC26Q8NHZ8 85 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 TWIST2Q8WVJ9 160 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 ITLN2Q8WWU7 325 aaPredicted RBP16.97■□□□□ 0.31
MSH5-207ENST00000425703 DIO2Q92813 273 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 PGM2Q96G03 612 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 BTBD9Q96Q07 612 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 VKORC1Q9BQB6 163 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 DOHHQ9BU89 302 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 ANGPTL4Q9BY76 406 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 DEFB127Q9H1M4 99 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 EXO1Q9UQ84 846 aaKnown RBP16.97■□□□□ 0.31
MSH5-207ENST00000425703 GPR55Q9Y2T6 319 aaPredicted RBP16.97■□□□□ 0.31
MSH5-207ENST00000425703 FIS1Q9Y3D6 152 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 PTGDR2Q9Y5Y4 395 aa16.97■□□□□ 0.31
MSH5-207ENST00000425703 BIRC5O15392 142 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 HCN1O60741 890 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 TBX19O60806 448 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 TRIM3O75382 744 aaPredicted RBP16.96■□□□□ 0.31
MSH5-207ENST00000425703 ABCB1P08183 1280 aaPredicted RBP16.96■□□□□ 0.31
MSH5-207ENST00000425703 LINC00032P0C843 101 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 NTSP30990 170 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 MAGEA5P43359 124 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 SERPINB4P48594 390 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 SMSP52788 366 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 ART3Q13508 389 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 SLC10A1Q14973 349 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 SH2D4BQ5SQS7 431 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 PRAMEF20Q5VT98 475 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 XKRXQ6PP77 449 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 ZCCHC23Q6ZST2 131 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 TRILQ7L0X0 811 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 NUP54Q7Z3B4 507 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 NUDCD3Q8IVD9 361 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 OR5M3Q8NGP4 307 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 KAT2AQ92830 837 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 NTNG2Q96CW9 530 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 VSTM2LQ96N03 204 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 ZIM3Q96PE6 472 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 PHF12Q96QT6 1004 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 ZNF703Q9H7S9 590 aaPredicted RBP16.96■□□□□ 0.31
MSH5-207ENST00000425703 TAS2R9Q9NYW1 312 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 B4GALT7Q9UBV7 327 aa16.96■□□□□ 0.31
MSH5-207ENST00000425703 MYO7BQ6PIF6 2116 aa16.96■□□□□ 0.3
MSH5-207ENST00000425703 LRRC3CA6NJW4 275 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 TMEM233B4DJY2 109 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 PLOD2O00469 737 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 ADAM10O14672 748 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 PIP5K1BO14986 540 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 ERLIN1O75477 346 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 PDE9AO76083 593 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 SNUPNO95149 360 aaKnown RBP16.95■□□□□ 0.3
MSH5-207ENST00000425703 TACR1P25103 407 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 ARRB2P32121 409 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 CASP3P42574 277 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 NCBP2P52298 156 aaKnown RBP eCLIP16.95■□□□□ 0.39e-7■■■■□ 23.4
MSH5-207ENST00000425703 RFTN2Q52LD8 501 aaPredicted RBP16.95■□□□□ 0.3
MSH5-207ENST00000425703 XKR7Q5GH72 579 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 TMEM198Q66K66 360 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 MRGPRGQ86SM5 289 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 PACS2Q86VP3 889 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 DDIASQ8IXT1 998 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 SLC34A3Q8N130 599 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 OR7G2Q8NG99 324 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 EGLN2Q96KS0 407 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 ZNF597Q96LX8 424 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 PPP3R2Q96LZ3 170 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 DMRTA2Q96SC8 542 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 TP63Q9H3D4 680 aaPredicted RBP16.95■□□□□ 0.3
MSH5-207ENST00000425703 ACKR4Q9NPB9 350 aa16.95■□□□□ 0.3
MSH5-207ENST00000425703 KLF2Q9Y5W3 355 aaPredicted RBP16.95■□□□□ 0.3
MSH5-207ENST00000425703 NBPF19A0A087WUL8 3843 aa16.94■□□□□ 0.3
MSH5-207ENST00000425703 AQP7O14520 342 aa16.94■□□□□ 0.3
MSH5-207ENST00000425703 BCKDKO14874 412 aa16.94■□□□□ 0.3
MSH5-207ENST00000425703 ABCB7O75027 752 aa16.94■□□□□ 0.3
MSH5-207ENST00000425703 COQ9O75208 318 aa16.94■□□□□ 0.3
MSH5-207ENST00000425703 ZWINTO95229 277 aa16.94■□□□□ 0.3
MSH5-207ENST00000425703 TPOP07202 933 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms