RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.64□□□□□ -0.87
MDC1-205ENST00000425072 CDC73Q6P1J9 531 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 FAM199XQ6PEV8 388 aaPredicted RBP9.64□□□□□ -0.87
MDC1-205ENST00000425072 TMEM205Q6UW68 189 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 CPEB2Q7Z5Q1 589 aaKnown RBP9.64□□□□□ -0.87
MDC1-205ENST00000425072 AQP12AQ8IXF9 295 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 PRSS58Q8IYP2 241 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 CLEC4FQ8N1N0 589 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 GOLM1Q8NBJ4 401 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 OR7G2Q8NG99 324 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 OR52E4Q8NGH9 312 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 OR2Y1Q8NGV0 311 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 PNPT1Q8TCS8 783 aaKnown RBP9.64□□□□□ -0.87
MDC1-205ENST00000425072 PTPMT1Q8WUK0 201 aaPredicted RBP9.64□□□□□ -0.87
MDC1-205ENST00000425072 JADE3Q92613 823 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 PMM1Q92871 262 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 CCDC124Q96CT7 223 aaKnown RBP9.64□□□□□ -0.87
MDC1-205ENST00000425072 FBXL20Q96IG2 436 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 CRB3Q9BUF7 120 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 SPATA5L1Q9BVQ7 753 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 PCDHAC1Q9H158 963 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 OR10A5Q9H207 317 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 PIGUQ9H490 435 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 IKZF5Q9H5V7 419 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 PIF1Q9H611 641 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 SOX17Q9H6I2 414 aaPredicted RBP9.64□□□□□ -0.87
MDC1-205ENST00000425072 GPATCH2Q9NW75 528 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 DLL3Q9NYJ7 618 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 COPS7AQ9UBW8 275 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 CTSFQ9UBX1 484 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 KCND3Q9UK17 655 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 PACSIN3Q9UKS6 424 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 PTRH2Q9Y3E5 179 aaKnown RBP9.64□□□□□ -0.87
MDC1-205ENST00000425072 CLDN16Q9Y5I7 305 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 SNX13Q9Y5W8 968 aa9.64□□□□□ -0.87
MDC1-205ENST00000425072 FER1L5A0AVI2 2057 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 ZFYVE26Q68DK2 2539 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 MAST4O15021 2626 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 A0A1W2PS29 197 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 CXCR6O00574 342 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 ACOT8O14734 319 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 FKBP6O75344 327 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 SERPINB7O75635 380 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 PDE9AO76083 593 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 AK1P00568 194 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 NR2F1P10589 423 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 ICAM2P13598 275 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 ETFAP13804 333 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 GGT1P19440 569 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 S1PR1P21453 382 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 FOLR3P41439 243 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 PGDP52209 483 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 MVDP53602 400 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 CLDN6P56747 220 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 PSPHP78330 225 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 GABREP78334 506 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 ELF3P78545 371 aaPredicted RBP9.63□□□□□ -0.87
MDC1-205ENST00000425072 MRPS35P82673 323 aaKnown RBP9.63□□□□□ -0.87
MDC1-205ENST00000425072 LASP1Q14847 261 aaKnown RBP9.63□□□□□ -0.87
MDC1-205ENST00000425072 LTB4RQ15722 352 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 ADRM1Q16186 407 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 FHL5Q5TD97 284 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 PRAMEF8Q5VWM4 474 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 PRAMEF7Q5VXH5 474 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 HLA-DQA1Q5Y7H0 255 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 LCN10Q6JVE6 187 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 REEP3Q6NUK4 255 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 AAGABQ6PD74 315 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 TIPARPQ7Z3E1 657 aaKnown RBP9.63□□□□□ -0.87
MDC1-205ENST00000425072 ANKRD37Q7Z713 158 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 EID3Q8N140 333 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 FAM156AQ8NDB6 213 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 HIPK4Q8NE63 616 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 OR1N1Q8NGS0 311 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 STMN2Q93045 179 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 C16orf58Q96GQ5 468 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 NSMCE2Q96MF7 247 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 ZNF607Q96SK3 696 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 STACQ99469 402 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 SPSB2Q99619 263 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 LPAR4Q99677 370 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 EFHD1Q9BUP0 239 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 CNPPD1Q9BV87 410 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 TRIM8Q9BZR9 551 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 OR51I1Q9H343 314 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 DENND2DQ9H6A0 471 aaPredicted RBP9.63□□□□□ -0.87
MDC1-205ENST00000425072 MTHFD2LQ9H903 347 aaPredicted RBP9.63□□□□□ -0.87
MDC1-205ENST00000425072 AKIRIN1Q9H9L7 192 aaPredicted RBP9.63□□□□□ -0.87
MDC1-205ENST00000425072 A4GALTQ9NPC4 353 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 DUSP22Q9NRW4 184 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 P2RX2Q9UBL9 471 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 EGFL7Q9UHF1 273 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 RPS6KA6Q9UK32 745 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 MRTO4Q9UKD2 239 aaKnown RBP9.63□□□□□ -0.87
MDC1-205ENST00000425072 NUP210LQ5VU65 1888 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 PTPRBP23467 1997 aa9.63□□□□□ -0.87
MDC1-205ENST00000425072 NAV2Q8IVL1 2488 aa9.62□□□□□ -0.87
MDC1-205ENST00000425072 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.62□□□□□ -0.87
MDC1-205ENST00000425072 A0A0G2JPF8 293 aa9.62□□□□□ -0.87
MDC1-205ENST00000425072 A0A1W2PNU3 283 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms