RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TNFAIP8L2Q6P589 184 aaPredicted RBP10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 SPATA2LQ8IUW3 424 aaPredicted RBP10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 BBS10Q8TAM1 723 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 SMAP2Q8WU79 429 aaPredicted RBP10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 SLC35A5Q9BS91 424 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 DPH7Q9BTV6 452 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 ADAT1Q9BUB4 502 aaKnown RBP10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 KIF25Q9UIL4 384 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 ABCD4O14678 606 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 PRAMEF11O60813 436 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 LDOC1O95751 146 aaPredicted RBP10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 ANXA4P09525 319 aaPredicted RBP10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 NR2F6P10588 404 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 CPEP16870 476 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 CD9P21926 228 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 ATP5A1P25705 553 aaKnown RBP10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 PTGER1P34995 402 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 FNTBP49356 437 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 RGS4P49798 205 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 AKR1C2P52895 323 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 WNT4P56705 351 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 AKR1C1Q04828 323 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 ACSM2AQ08AH3 577 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 OPCMLQ14982 345 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 MPEG1Q2M385 716 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 SYT14P1Q58G82 188 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 TCTE1Q5JU00 501 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 ACSM2BQ68CK6 577 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 KIAA1161Q6NSJ0 714 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 ZNF613Q6PF04 617 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 PAQR7Q86WK9 346 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 ZNF683Q8IZ20 524 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 ATOH1Q92858 354 aaPredicted RBP10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 MAPKAP1Q9BPZ7 522 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 CACNG6Q9BXT2 260 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 P2RY12Q9H244 342 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 EGLN3Q9H6Z9 239 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 RC3H2Q9HBD1 1191 aaKnown RBP10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 ERVK-19Q9WJR5 959 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 LIPT1Q9Y234 373 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 IRAK3Q9Y616 596 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 PTCH2Q9Y6C5 1203 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 GBF1Q92538 1859 aa10.68□□□□□ -0.7
SEC61A1-202ENST00000424880 SULT1B1O43704 296 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 DPM1O60762 260 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 SOD1P00441 154 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 IFNA14P01570 189 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 CXCL2P19875 107 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 CD22P20273 847 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 MAPK1P28482 360 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 PCSK1P29120 753 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 GDI2P50395 445 aaKnown RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 BLVRAP53004 296 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 DOC2AQ14183 400 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 FRG2Q64ET8 278 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ZNF704Q6ZNC4 412 aaPredicted RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 Q6ZTK2 550 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 SZRD1Q7Z422 152 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 VRK3Q8IV63 474 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ZFP82Q8N141 532 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 YIPF5Q969M3 257 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 INTS12Q96CB8 462 aaKnown RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 FRG2BQ96QU4 278 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ORAI3Q9BRQ5 295 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 SARGQ9BW04 601 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 EMC7Q9NPA0 242 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 FNIP2Q9P278 1114 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 SF3B6Q9Y3B4 125 aaKnown RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 MFSD2BA6NFX1 497 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ANXA2P2A6NMY6 339 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 G3V3Q6 166 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 GABRPO00591 440 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 RECKO95980 971 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 HLA-FP30511 346 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 LCN1P31025 176 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 RECQLP46063 649 aaPredicted RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 XCR1P46094 333 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 BTG1P62324 171 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ERVK-25P63136 954 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 CDK6Q00534 326 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 GINS1Q14691 196 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ZNF169Q14929 603 aaPredicted RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 FAM209BQ5JX69 171 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 SIAH3Q8IW03 269 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 GANCQ8TET4 914 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 ZFPM2Q8WW38 1151 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 MED8Q96G25 268 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 SCMH1Q96GD3 660 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 GPA33Q99795 319 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 SOSTQ9BQB4 213 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 TTTY10Q9BZA0 68 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 PLA2G12AQ9BZM1 189 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 CHST8Q9H2A9 424 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 TRPS1Q9UHF7 1281 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 PHF11Q9UIL8 331 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 C1orf226A1L170 272 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 MGAT4DA6NG13 374 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 LINC00587B1AMM8 73 aa10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 HYAL3O43820 417 aaPredicted RBP10.67□□□□□ -0.7
SEC61A1-202ENST00000424880 GMDSO60547 372 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms