RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ARSGQ96EG1 525 aa12.5□□□□□ -0.41
PRPF39-202ENST00000424478 DCBLD2Q96PD2 775 aa12.5□□□□□ -0.41
PRPF39-202ENST00000424478 ITPAQ9BY32 194 aa12.5□□□□□ -0.41
PRPF39-202ENST00000424478 KAT8Q9H7Z6 458 aaKnown RBP12.5□□□□□ -0.41
PRPF39-202ENST00000424478 TMEM45AQ9NWC5 275 aa12.5□□□□□ -0.41
PRPF39-202ENST00000424478 NINQ8N4C6 2090 aa12.5□□□□□ -0.41
PRPF39-202ENST00000424478 GXYLT2A0PJZ3 443 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 MAN1A2O60476 641 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 DNAJC8O75937 253 aaPredicted RBP12.49□□□□□ -0.41
PRPF39-202ENST00000424478 MATN1P21941 496 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 IL10P22301 178 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 PCOLCEQ15113 449 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 DUSP5Q16690 384 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 CYP51A1Q16850 503 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 SAXO2Q658L1 398 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 CYP2R1Q6VVX0 501 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 MSANTD1Q6ZTZ1 278 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 CDS1Q92903 461 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 ZNF583Q96ND8 569 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 QRSL1Q9H0R6 528 aaKnown RBP12.49□□□□□ -0.41
PRPF39-202ENST00000424478 TMEM181Q9P2C4 612 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 KLK10O43240 276 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 ACP2P11117 423 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 LIPCP11150 499 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 COX6A1P12074 109 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 MS4A2Q01362 244 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 MLC1Q15049 377 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 SYPL1Q16563 259 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 TBC1D25Q3MII6 688 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 TMEM205Q6UW68 189 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 C9orf40Q8IXQ3 194 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 ULK2Q8IYT8 1036 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 TRIML2Q8N7C3 387 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 PSMA8Q8TAA3 256 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 TUBB6Q9BUF5 446 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 ALG2Q9H553 416 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 C3orf14Q9HBI5 128 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 FBXL4Q9UKA2 621 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 NPIPA5A0A0B4J1W7 369 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 MED19A0JLT2 244 aaPredicted RBP12.49□□□□□ -0.41
PRPF39-202ENST00000424478 NPIPA7E9PJI5 369 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 F10P00742 488 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 NPIPA8P0DM63 369 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 MMP11P24347 488 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 SLC37A1P57057 533 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 MAP4K2Q12851 820 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 ADRM1Q16186 407 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 MFSD12Q6NUT3 480 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 FIGNL1Q6PIW4 674 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 ZNF615Q8N8J6 731 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 APCDD1LQ8NCL9 501 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 NEURL3Q96EH8 262 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 LPAR4Q99677 370 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 SLC7A8Q9UHI5 535 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 C19orf53Q9UNZ5 99 aaPredicted RBP12.49□□□□□ -0.41
PRPF39-202ENST00000424478 PADI2Q9Y2J8 665 aa12.49□□□□□ -0.41
PRPF39-202ENST00000424478 IGHV1-45A0A0A0MS14 117 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 TRBV11-1A0A0K0K1C0 115 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 EVPLLA8MZ36 301 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 HMGN4O00479 90 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 ZNF354AO60765 605 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-202ENST00000424478 PRR5P85299 388 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 Q0VFX4 171 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 CYP27C1Q4G0S4 372 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 C6orf163Q5TEZ5 329 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 NPSR1Q6W5P4 371 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 SAMD14Q8IZD0 417 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-202ENST00000424478 SLC35A4Q96G79 324 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 FBXL20Q96IG2 436 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 OR7D2Q96RA2 312 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 P4HTMQ9NXG6 502 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 ZNF639Q9UID6 485 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 NXT1Q9UKK6 140 aaKnown RBP12.48□□□□□ -0.41
PRPF39-202ENST00000424478 ACACBO00763 2458 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 MAP1BP46821 2468 aaKnown RBP12.48□□□□□ -0.41
PRPF39-202ENST00000424478 WWP2O00308 870 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 PLOD3O60568 738 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 CREG1O75629 220 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
PRPF39-202ENST00000424478 IGKV3-11P04433 115 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 BCHEP06276 602 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 GABRA3P34903 492 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 PIGGQ5H8A4 983 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 ZAR1Q86SH2 424 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 PTOV1Q86YD1 416 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 NFAM1Q8NET5 270 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-202ENST00000424478 NFKBIDQ8NI38 313 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 GPR151Q8TDV0 419 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 WDR60Q8WVS4 1066 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 HOPXQ9BPY8 73 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-202ENST00000424478 FOLH1BQ9HBA9 442 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 GIN1Q9NXP7 522 aa12.48□□□□□ -0.41
PRPF39-202ENST00000424478 HEMK1Q9Y5R4 338 aaPredicted RBP12.48□□□□□ -0.41
PRPF39-202ENST00000424478 PTPRQQ9UMZ3 2332 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 SAGE2PA6NJ88 616 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 PLOD2O00469 737 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 EFSO43281 561 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 OPN1SWP03999 348 aa12.47□□□□□ -0.41
PRPF39-202ENST00000424478 ZCCHC18P0CG32 403 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms