RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GOLGA8TH3BQL2 631 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 CYR61O00622 381 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 NDUFB5O43674 189 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 ICOSLGO75144 302 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 TNFRSF21O75509 655 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 ZNF189O75820 626 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 SYNGR4O95473 234 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 METTL18O95568 372 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 RHOXF2BP0C7M4 288 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 EPB42P16452 691 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 CPN2P22792 545 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 CNTFP26441 200 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 SRD5A2P31213 254 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 SLC1A1P43005 524 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 EIF1AXP47813 144 aaKnown RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 KCNC1P48547 511 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 DVL1P1P54792 670 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 TPD52P55327 224 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 CLDN15P56746 228 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 UBA52P62987 128 aaKnown RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 IL13RA1P78552 427 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 MLC1Q15049 377 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 EBPQ15125 230 aaKnown RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 PPA1Q15181 289 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 NNATQ16517 81 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 BCL2A1Q16548 175 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 TSNAXIP1Q2TAA8 658 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 DESI1Q6ICB0 168 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 OR5M10Q6IEU7 315 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 TMEM108Q6UXF1 575 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 PLCZ1Q86YW0 608 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 CPNE9Q8IYJ1 553 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 SPATA6LQ8N4H0 392 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 ANKRD53Q8N9V6 530 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 FAM71DQ8N9W8 422 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 TOR1AIP2Q8NFQ8 470 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 ABHD11Q8NFV4 315 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 TRIM58Q8NG06 486 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 OR4K17Q8NGC6 315 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 SLC35G2Q8TBE7 412 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 PIWIL2Q8TC59 973 aaKnown RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 RIT1Q92963 219 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 FBXO17Q96EF6 278 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 GMPPAQ96IJ6 420 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 BIRC8Q96P09 236 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 SLC6A7Q99884 636 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 PACSIN1Q9BY11 444 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 REXO4Q9GZR2 422 aaKnown RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 SPNS1Q9H2V7 528 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 MYOZ1Q9NP98 299 aaPredicted RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 FBXO34Q9NWN3 711 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 NENFQ9UMX5 172 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 DAPP1Q9UN19 280 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 EXO1Q9UQ84 846 aaKnown RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 ATP23Q9Y6H3 246 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 TRRAPQ9Y4A5 3859 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 VWFP04275 2813 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 PRKDCP78527 4128 aaKnown RBP5.62□□□□□ -1.51
SDCBP-203ENST00000424270 HEATR5BQ9P2D3 2071 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 MALRD1Q5VYJ5 2156 aa5.62□□□□□ -1.51
SDCBP-203ENST00000424270 CTAGE15A4D2H0 777 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 PRAMEF25A6NGN4 478 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 ANKDD1BA6NHY2 528 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 POM121CA8CG34 1229 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 B4DSR2 109 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 E7EQL1 145 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 EIF1AYO14602 144 aaKnown RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 PSTPIP1O43586 416 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 AQP8O94778 261 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 VAPBO95292 243 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 GUCA1CO95843 209 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 IGKV3-11P04433 115 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 TUBBP07437 444 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 ERCC1P07992 297 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 DHRS4L1P0CG22 281 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 SMIM10L1P0DMW3 83 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 ALOX15P16050 662 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 DDX5P17844 614 aaKnown RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 HK1P19367 917 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 COMTP21964 271 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 PSMA3P25788 255 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 IL2RGP31785 369 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 HNRNPH1P31943 449 aaKnown RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 CDH15P55291 814 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 SESN2P58004 480 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 SNRPD2P62316 118 aaKnown RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 REEP5Q00765 189 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 MYL5Q02045 173 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 PLCXD2Q0VAA5 305 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 KIF5AQ12840 1032 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 CTBP1Q13363 440 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 TMEM201Q5SNT2 666 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 C11orf71Q6IPW1 123 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 KLHL17Q6TDP4 642 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 BBS12Q6ZW61 710 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 BHLHA15Q7RTS1 189 aaPredicted RBP5.61□□□□□ -1.51
SDCBP-203ENST00000424270 CTAGE6Q86UF2 777 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 MYO1HQ8N1T3 1032 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 ADCY4Q8NFM4 1077 aa5.61□□□□□ -1.51
SDCBP-203ENST00000424270 TTLQ8NG68 377 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms