RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 NNMTP40261 264 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 STAT5AP42229 794 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 TGM4P49221 684 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 KHKP50053 298 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 RNF144AP50876 292 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-204ENST00000424143 ABATP80404 500 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 CD83Q01151 205 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 SPDYE7PQ495Y7 208 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 ARSIQ5FYB1 569 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 IER5LQ5T953 404 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 SDE2Q6IQ49 451 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 RBM45Q8IUH3 476 aaKnown RBP14.36□□□□□ -0.11
C9orf3-204ENST00000424143 CFAP206Q8IYR0 622 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 TMEM145Q8NBT3 493 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 ANKK1Q8NFD2 765 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 NLGN4YQ8NFZ3 816 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-204ENST00000424143 CXorf40AQ8TE69 158 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 PXYLP1Q8TE99 480 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 UBASH3BQ8TF42 649 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 DNAJA4Q8WW22 397 aaPredicted RBP14.36□□□□□ -0.11
C9orf3-204ENST00000424143 DEDD2Q8WXF8 326 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 SMG7Q92540 1137 aaKnown RBP14.36□□□□□ -0.11
C9orf3-204ENST00000424143 SLC35G5Q96KT7 338 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 MRGPRX3Q96LB0 322 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 ZDHHC5Q9C0B5 715 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 STMN3Q9NZ72 180 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 MARK1Q9P0L2 795 aa14.36□□□□□ -0.11
C9orf3-204ENST00000424143 ELFN1P0C7U0 828 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 APEX1P27695 318 aaKnown RBP14.35□□□□□ -0.11
C9orf3-204ENST00000424143 REEP5Q00765 189 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 DPTQ07507 201 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 ADAM15Q13444 863 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 PIN1Q13526 163 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-204ENST00000424143 LRRC73Q5JTD7 316 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 AADACL4Q5VUY2 407 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 SIGIRRQ6IA17 410 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 BHLHB9Q6PI77 547 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 CDH24Q86UP0 819 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 NUDT13Q86X67 352 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 KIF18BQ86Y91 864 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 CAMKK1Q8N5S9 505 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 IQCF1Q8N6M8 205 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 OR2L2Q8NH16 312 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 SUN3Q8TAQ9 357 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 OSTF1Q92882 214 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 IRF7Q92985 503 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 RGMAQ96B86 450 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 SAP130Q9H0E3 1048 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 SERHL2Q9H4I8 314 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 DDX31Q9H8H2 851 aaKnown RBP14.35□□□□□ -0.11
C9orf3-204ENST00000424143 TRIM45Q9H8W5 580 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-204ENST00000424143 ZNF275Q9NSD4 429 aaPredicted RBP14.35□□□□□ -0.11
C9orf3-204ENST00000424143 RNF186Q9NXI6 227 aa14.35□□□□□ -0.11
C9orf3-204ENST00000424143 PRAMEF27A3QJZ7 478 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 CASKO14936 926 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 EFCAB14O75071 495 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 OR2B3O76000 313 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 NFATC1O95644 943 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 FGF19O95750 216 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 FGBP02675 491 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 SLC1A3P43003 542 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 OR3A3P47888 321 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 MTNR1BP49286 362 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 HOXC5Q00444 222 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 ZNF155Q12901 538 aaPredicted RBP14.34□□□□□ -0.11
C9orf3-204ENST00000424143 TRAM2Q15035 370 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 WSCD2Q2TBF2 565 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 BCDIN3DQ7Z5W3 292 aaKnown RBP14.34□□□□□ -0.11
C9orf3-204ENST00000424143 C17orf64Q86WR6 236 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 TMEM25Q86YD3 366 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 DCUN1D3Q8IWE4 304 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 TRIM48Q8IWZ4 208 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 FAM109AQ8N4B1 249 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 KLHL36Q8N4N3 616 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 ARHGDIGQ99819 225 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 ZNF649Q9BS31 505 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 SLC46A2Q9BY10 475 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 MKRN2Q9H000 416 aaKnown RBP14.34□□□□□ -0.11
C9orf3-204ENST00000424143 IRF2BPLQ9H1B7 796 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 SRRDQ9UH36 339 aa14.34□□□□□ -0.11
C9orf3-204ENST00000424143 SHOXO15266 292 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 HRO43593 1189 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 CSF2P04141 144 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 RPN2P04844 631 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 FHP07954 510 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 NR2F1P10589 423 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 ARSBP15848 533 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 HTR2BP41595 481 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 CAPZA2P47755 286 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 RFX3P48380 749 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 ATP12AP54707 1039 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 FAM209AQ5JX71 171 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 LAMTOR1Q6IAA8 161 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 TMEM107Q6UX40 140 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 IQCHQ86VS3 1027 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 MMP21Q8N119 569 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 ZNF740Q8NDX6 193 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 GATAD2BQ8WXI9 593 aa14.33□□□□□ -0.11
C9orf3-204ENST00000424143 AKAP1Q92667 903 aaKnown RBP eCLIP14.33□□□□□ -0.11
C9orf3-204ENST00000424143 RAB8BQ92930 207 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms