RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 COQ9O75208 318 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 BCAS2O75934 225 aaPredicted RBP11.52□□□□□ -0.57
SKA1-203ENST00000417656 C6orf47O95873 294 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 SP1P08047 785 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 NME2P22392 152 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 IDH3AP50213 366 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 AQP5P55064 265 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 MANFP55145 182 aaKnown RBP11.52□□□□□ -0.57
SKA1-203ENST00000417656 CORO7P57737 925 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 UFM1P61960 85 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 INPP5JQ15735 1006 aaPredicted RBP11.52□□□□□ -0.57
SKA1-203ENST00000417656 PGS1Q32NB8 556 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 LSM12Q3MHD2 195 aaKnown RBP11.52□□□□□ -0.57
SKA1-203ENST00000417656 OR4F3Q6IEY1 312 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 SLC25A25Q6KCM7 469 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 OPN5Q6U736 354 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 ACAD11Q709F0 780 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 SZRD1Q7Z422 152 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 GALNTL5Q7Z4T8 443 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 MDGA2Q7Z553 956 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 CAMKMTQ7Z624 323 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 ZNF605Q86T29 641 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 GPALPP1Q8IXQ4 340 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 PRR22Q8IZ63 422 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 TAGAPQ8N103 731 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 OR2L13Q8N349 312 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 TMEM178AQ8NBL3 297 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 C17orf47Q8NEP4 570 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 CEP70Q8NHQ1 597 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 CPT1CQ8TCG5 803 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 TMEM125Q96AQ2 219 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 COQ8BQ96D53 544 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 SNRNP40Q96DI7 357 aaKnown RBP11.52□□□□□ -0.57
SKA1-203ENST00000417656 SPACA9Q96E40 222 aaPredicted RBP11.52□□□□□ -0.57
SKA1-203ENST00000417656 ELP4Q96EB1 424 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 TEX37Q96LM6 180 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 PRPF18Q99633 342 aaKnown RBP11.52□□□□□ -0.57
SKA1-203ENST00000417656 DUSP26Q9BV47 211 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 BHLHE41Q9C0J9 482 aaPredicted RBP11.52□□□□□ -0.57
SKA1-203ENST00000417656 TCF7L2Q9NQB0 619 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 SIRT3Q9NTG7 399 aaPredicted RBP11.52□□□□□ -0.57
SKA1-203ENST00000417656 C19orf53Q9UNZ5 99 aaPredicted RBP11.52□□□□□ -0.57
SKA1-203ENST00000417656 MAPRE3Q9UPY8 281 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 GPR45Q9Y5Y3 372 aa11.52□□□□□ -0.57
SKA1-203ENST00000417656 A0A0G2JMM0 328 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 A0A1W2PPB8 328 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 A0A1W2PRB8 838 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 A0A1W2PRS3 328 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 FRG2CA6NGY1 282 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 KIR3DP1A8MWS1 328 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 E9PBE3 544 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 ERN1O75460 977 aaKnown RBP11.51□□□□□ -0.57
SKA1-203ENST00000417656 TGDSO95455 350 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 PSMG1O95456 288 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 ABCB1P08183 1280 aaPredicted RBP11.51□□□□□ -0.57
SKA1-203ENST00000417656 IFI6P09912 130 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 FBXO45P0C2W1 286 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 PLA2G2AP14555 144 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 IDO1P14902 403 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 KIR3DL1P43629 444 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 CLNS1AP54105 237 aaKnown RBP11.51□□□□□ -0.57
SKA1-203ENST00000417656 INAQ16352 499 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 MAPKAPK3Q16644 382 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 ZNF791Q3KP31 576 aaPredicted RBP11.51□□□□□ -0.57
SKA1-203ENST00000417656 SPANXN4Q5MJ08 99 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 RPUSD3Q6P087 351 aaKnown RBP11.51□□□□□ -0.57
SKA1-203ENST00000417656 FAM180AQ6UWF9 173 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 NPSR1Q6W5P4 371 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 RTL4Q6ZR62 310 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 WDR53Q7Z5U6 358 aaPredicted RBP11.51□□□□□ -0.57
SKA1-203ENST00000417656 CLECL1Q8IZS7 167 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 SLC15A4Q8N697 577 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 PSD4Q8NDX1 1056 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 FAM13CQ8NE31 585 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 RFWD2Q8NHY2 731 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 TP53INP1Q96A56 240 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 TESCQ96BS2 214 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 LCORQ96JN0 433 aaPredicted RBP11.51□□□□□ -0.57
SKA1-203ENST00000417656 VSTM2LQ96N03 204 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 BTBD9Q96Q07 612 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 TAAR6Q96RI8 345 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 CLMPQ9H6B4 373 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 NPHS2Q9NP85 383 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 TIMMDC1Q9NPL8 285 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 EQTNQ9NQ60 294 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 ASF1BQ9NVP2 202 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 TAS2R9Q9NYW1 312 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 KLF13Q9Y2Y9 288 aaPredicted RBP11.51□□□□□ -0.57
SKA1-203ENST00000417656 PCDHGB6Q9Y5F9 930 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 SHANK1Q9Y566 2161 aa11.51□□□□□ -0.57
SKA1-203ENST00000417656 G3V3Y1 287 aa11.5□□□□□ -0.57
SKA1-203ENST00000417656 UBDO15205 165 aa11.5□□□□□ -0.57
SKA1-203ENST00000417656 RASAL1O95294 804 aa11.5□□□□□ -0.57
SKA1-203ENST00000417656 CCL3P10147 92 aa11.5□□□□□ -0.57
SKA1-203ENST00000417656 ABCD3P28288 659 aa11.5□□□□□ -0.57
SKA1-203ENST00000417656 IL12AP29459 219 aa11.5□□□□□ -0.57
SKA1-203ENST00000417656 SOAT1P35610 550 aa11.5□□□□□ -0.57
SKA1-203ENST00000417656 PPICP45877 212 aa11.5□□□□□ -0.57
SKA1-203ENST00000417656 WNT3P56703 355 aa11.5□□□□□ -0.57
SKA1-203ENST00000417656 NRG3P56975 720 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms