RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 MMP21Q8N119 569 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 CCNYL1Q8N7R7 359 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.2■■□□□ 1.35e-12■■■■■ 46.3
VEGFA-208ENST00000417285 CTHRC1Q96CG8 243 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 LCORQ96JN0 433 aaPredicted RBP23.2■■□□□ 1.3
VEGFA-208ENST00000417285 ACPTQ9BZG2 426 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 NXF5Q9H1B4 397 aaKnown RBP23.2■■□□□ 1.3
VEGFA-208ENST00000417285 UBQLN3Q9H347 655 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 GSTO2Q9H4Y5 243 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 MAT2BQ9NZL9 334 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 PRODH2Q9UF12 536 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 EMCNQ9ULC0 261 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 CELSR1Q9NYQ6 3014 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 NINQ8N4C6 2090 aa23.2■■□□□ 1.3
VEGFA-208ENST00000417285 CSMD2Q7Z408 3487 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 C15orf38-AP3S2A0A0A6YYH1 394 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 HSPB2A8KAH6 182 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 PCDH7O60245 1069 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 DRD5P21918 477 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 ADH7P40394 386 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 SLCO1A2P46721 670 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 CCT5P48643 541 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 CDK9P50750 372 aaKnown RBP23.19■■□□□ 1.3
VEGFA-208ENST00000417285 ACSM2AQ08AH3 577 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 HSPB2Q16082 182 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 CES4AQ5XG92 561 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 ACSM2BQ68CK6 577 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 TMEM81Q6P7N7 255 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 NTNG2Q96CW9 530 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 ERP27Q96DN0 273 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 TMEM41AQ96HV5 264 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 ZNF681Q96N22 645 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 GNRHR2Q96P88 292 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 MID1IP1Q9NPA3 183 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 C15orf41Q9Y2V0 281 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 TIMM22Q9Y584 194 aa23.19■■□□□ 1.3
VEGFA-208ENST00000417285 GNG14A0A1W2PPG7 69 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 G3V2L1 256 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 H3BQF6 201 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 BCAS2O75934 225 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-208ENST00000417285 CHN1P15882 459 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 PPICP45877 212 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 HTR6P50406 440 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 SNTA1Q13424 505 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 BICRALQ6AI39 1079 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 SLC30A6Q6NXT4 461 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 SH2D5Q6ZV89 423 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 PM20D2Q8IYS1 436 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 CNRIP1Q96F85 164 aaPredicted RBP23.18■■□□□ 1.3
VEGFA-208ENST00000417285 TIMP4Q99727 224 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 ZNF559Q9BR84 538 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 PFDN4Q9NQP4 134 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 UTS2RQ9UKP6 389 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 GRID1Q9ULK0 1009 aa23.18■■□□□ 1.3
VEGFA-208ENST00000417285 HIVEP1P15822 2718 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 SERTM1A2A2V5 107 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 SMIM23A6NLE4 172 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 EPPINO95925 133 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 PROCP04070 461 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 HMGCS1Q01581 520 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 EXOSC7Q15024 291 aaKnown RBP23.17■■□□□ 1.3
VEGFA-208ENST00000417285 FNDC7Q5VTL7 733 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 TIGD3Q6B0B8 471 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 VASNQ6EMK4 673 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 LIX1LQ8IVB5 337 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 PRR22Q8IZ63 422 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 ADCY4Q8NFM4 1077 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 KCNA7Q96RP8 456 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 METTL7AQ9H8H3 244 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 DTX4Q9Y2E6 619 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 DLGAP4Q9Y2H0 992 aa23.17■■□□□ 1.3
VEGFA-208ENST00000417285 CBX7O95931 251 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 IL3P08700 152 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 TIA1P31483 386 aaKnown RBP eCLIP23.16■■□□□ 1.39e-14■■■□□ 15.1
VEGFA-208ENST00000417285 CRHR1P34998 444 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 PEX19P40855 299 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 GSTM5P46439 218 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 PSPHP78330 225 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 RAE1P78406 368 aaKnown RBP23.16■■□□□ 1.3
VEGFA-208ENST00000417285 CRYZQ08257 329 aaKnown RBP23.16■■□□□ 1.3
VEGFA-208ENST00000417285 HEPACAMQ14CZ8 416 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 TRMT12Q53H54 448 aaKnown RBP23.16■■□□□ 1.3
VEGFA-208ENST00000417285 NHSL2Q5HYW2 709 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 CFAP157Q5JU67 520 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 CDH24Q86UP0 819 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 CCDC63Q8NA47 563 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 OR52R1Q8NGF1 315 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 OR1J4Q8NGS1 313 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 RDH11Q8TC12 318 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 ZNF675Q8TD23 568 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 APIPQ96GX9 242 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 ITPAQ9BY32 194 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 SHCBP1LQ9BZQ2 653 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 HEY2Q9UBP5 337 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 ITGB1BP2Q9UKP3 347 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 PLLPQ9Y342 182 aa23.16■■□□□ 1.3
VEGFA-208ENST00000417285 COPEO14579 308 aa23.15■■□□□ 1.3
VEGFA-208ENST00000417285 TO15178 435 aa23.15■■□□□ 1.3
VEGFA-208ENST00000417285 PLIN3O60664 434 aa23.15■■□□□ 1.3
VEGFA-208ENST00000417285 CRCPO75575 148 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms