RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TIA1P31483 386 aaKnown RBP eCLIP13.82□□□□□ -0.2
UBXN4-203ENST00000416538 CASP3P42574 277 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 SLCO1A2P46721 670 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 KRT6CP48668 564 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 EMDP50402 254 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 CRYZQ08257 329 aaKnown RBP13.82□□□□□ -0.2
UBXN4-203ENST00000416538 ZNF628Q5EBL2 1059 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 LGSNQ5TDP6 509 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 HLA-DQA1Q5Y7H0 255 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 LCA5Q86VQ0 697 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 NAXEQ8NCW5 288 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 OR52R1Q8NGF1 315 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 OR9A2Q8NGT5 310 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 METTL6Q8TCB7 284 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 SARAFQ96BY9 339 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 C14orf79Q96F83 325 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 ANGPTL4Q9BY76 406 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 RUBCNLQ9H714 662 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 EXO5Q9H790 373 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 QPCTLQ9NXS2 382 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 UTS2RQ9UKP6 389 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 ACAD8Q9UKU7 415 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 DLGAP4Q9Y2H0 992 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 C15orf41Q9Y2V0 281 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 MED13LQ71F56 2210 aa13.82□□□□□ -0.2
UBXN4-203ENST00000416538 MPDZO75970 2070 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 WDR1O75083 606 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 UGT2B11O75310 529 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 PPM1BO75688 479 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 ESRRBO95718 433 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 CDK9P50750 372 aaKnown RBP13.81□□□□□ -0.2
UBXN4-203ENST00000416538 TRA2BP62995 288 aaKnown RBP13.81□□□□□ -0.2
UBXN4-203ENST00000416538 TLE4Q04727 773 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 WLSQ5T9L3 541 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 C6orf163Q5TEZ5 329 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 NPSR1Q6W5P4 371 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 ZYG11AQ6WRX3 759 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 ACAD11Q709F0 780 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 SLC22A9Q8IVM8 553 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 ULK2Q8IYT8 1036 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 RELL2Q8NC24 303 aaPredicted RBP13.81□□□□□ -0.2
UBXN4-203ENST00000416538 ZNF675Q8TD23 568 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 EPS8L3Q8TE67 593 aaKnown RBP13.81□□□□□ -0.2
UBXN4-203ENST00000416538 C16orf78Q8WTQ4 265 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 KAT2AQ92830 837 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 EXOSC8Q96B26 276 aaKnown RBP13.81□□□□□ -0.2
UBXN4-203ENST00000416538 OMA1Q96E52 524 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 GNRHR2Q96P88 292 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 GALNT9Q9HCQ5 603 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 BCAP29Q9UHQ4 241 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 SLC6A5Q9Y345 797 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 CELSR1Q9NYQ6 3014 aa13.81□□□□□ -0.2
UBXN4-203ENST00000416538 C17orf51A8MQB3 221 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 TP53I11O14683 189 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 GNB5O14775 395 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 GLRA3O75311 464 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 GUCY1B2O75343 617 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 ULK1O75385 1050 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 HPNP05981 417 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 ENO1P06733 434 aaKnown RBP13.8□□□□□ -0.2
UBXN4-203ENST00000416538 GSTA1P08263 222 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 POU3F2P20265 443 aaPredicted RBP13.8□□□□□ -0.2
UBXN4-203ENST00000416538 PTPN6P29350 595 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 SSTR2P30874 369 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 DEKP35659 375 aaKnown RBP13.8□□□□□ -0.2
UBXN4-203ENST00000416538 TMED10P49755 219 aaKnown RBP13.8□□□□□ -0.2
UBXN4-203ENST00000416538 PKNOX1P55347 436 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 DLX5P56178 289 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 CORO7P57737 925 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 ACSM2AQ08AH3 577 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 CEBPEQ15744 281 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 ACSF3Q4G176 576 aaPredicted RBP13.8□□□□□ -0.2
UBXN4-203ENST00000416538 EIPR1Q53HC9 387 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 TBCELQ5QJ74 424 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 ACSM2BQ68CK6 577 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 GALNT18Q6P9A2 607 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 CCDC116Q8IYX3 515 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 CCNYL1Q8N7R7 359 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 TMEM41AQ96HV5 264 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 LCORQ96JN0 433 aaPredicted RBP13.8□□□□□ -0.2
UBXN4-203ENST00000416538 SECISBP2Q96T21 854 aaKnown RBP13.8□□□□□ -0.2
UBXN4-203ENST00000416538 FAIM2Q9BWQ8 316 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 MID1IP1Q9NPA3 183 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 ALKBH4Q9NXW9 302 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 EXO1Q9UQ84 846 aaKnown RBP13.8□□□□□ -0.2
UBXN4-203ENST00000416538 PTGDR2Q9Y5Y4 395 aa13.8□□□□□ -0.2
UBXN4-203ENST00000416538 HRNRQ86YZ3 2850 aaPredicted RBP13.8□□□□□ -0.2
UBXN4-203ENST00000416538 C15orf38-AP3S2A0A0A6YYH1 394 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 SMIM23A6NLE4 172 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 PLIN3O60664 434 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 CT45A8P0DMV1 189 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 CT45A9P0DMV2 189 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 ZFP36L2P47974 494 aaKnown RBP13.79□□□□□ -0.2
UBXN4-203ENST00000416538 MASP1P48740 699 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 NRG3P56975 720 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 BTKQ06187 659 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 PLCXD2Q0VAA5 305 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 SPIN4Q56A73 249 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 CT45A2Q5DJT8 189 aa13.79□□□□□ -0.2
UBXN4-203ENST00000416538 TMEM198Q66K66 360 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms