RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 IL6P05231 212 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 CD46P15529 392 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 S100A3P33764 101 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 ATP4BP51164 291 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 NR0B1P51843 470 aaKnown RBP15.23■□□□□ 0.03
LINC00398-201ENST00000414407 WNT3P56703 355 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 NRG3P56975 720 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 LRRC74AQ0VAA2 488 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 INAQ16352 499 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 METTL21CQ5VZV1 264 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 TMEM64Q6YI46 380 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 MIER2Q8N344 545 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 Q8NA96 180 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 RFWD2Q8NHY2 731 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 NUDT8Q8WV74 236 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 HSPBAP1Q96EW2 488 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 SCMH1Q96GD3 660 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 LCORQ96JN0 433 aaPredicted RBP15.23■□□□□ 0.03
LINC00398-201ENST00000414407 SGCZQ96LD1 299 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 TEX37Q96LM6 180 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 VSTM2LQ96N03 204 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 SIGLEC12Q96PQ1 595 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 ZNF317Q96PQ6 595 aaPredicted RBP15.23■□□□□ 0.03
LINC00398-201ENST00000414407 ITPAQ9BY32 194 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 ANKRA2Q9H9E1 313 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 HPF1Q9NWY4 346 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 FAM120CQ9NX05 1096 aaKnown RBP15.23■□□□□ 0.03
LINC00398-201ENST00000414407 ANKRD10Q9NXR5 420 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 DCTN4Q9UJW0 460 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 DTX4Q9Y2E6 619 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 GPR55Q9Y2T6 319 aaPredicted RBP15.23■□□□□ 0.03
LINC00398-201ENST00000414407 PCDHGA10Q9Y5H3 936 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 BSNQ9UPA5 3926 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 COL6A6A6NMZ7 2263 aa15.23■□□□□ 0.03
LINC00398-201ENST00000414407 FRG2CA6NGY1 282 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 CAPN14A8MX76 684 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 EMC8O43402 210 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 ZNF354AO60765 605 aaPredicted RBP15.22■□□□□ 0.03
LINC00398-201ENST00000414407 OR6B1O95007 311 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 SP1P08047 785 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 FBXO45P0C2W1 286 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 NAGAP17050 411 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 IL12AP29459 219 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 SOX3P41225 446 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 TMED10P49755 219 aaKnown RBP15.22■□□□□ 0.03
LINC00398-201ENST00000414407 CDK9P50750 372 aaKnown RBP15.22■□□□□ 0.03
LINC00398-201ENST00000414407 NME5P56597 212 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 STX1BP61266 288 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 PRR5P85299 388 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 C19orf57Q0VDD7 668 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 ZNF791Q3KP31 576 aaPredicted RBP15.22■□□□□ 0.03
LINC00398-201ENST00000414407 FAM174BQ3ZCQ3 159 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 ZNF766Q5HY98 468 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 SPANXN4Q5MJ08 99 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 SPINK14Q6IE38 97 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 OR4F3Q6IEY1 312 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 SLC25A25Q6KCM7 469 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 LYPD8Q6UX82 237 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 ZNF227Q86WZ6 799 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 CYP4Z2PQ8N1L4 340 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 GOLM1Q8NBJ4 401 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 TMEM178AQ8NBL3 297 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 TMEM125Q96AQ2 219 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 MOAP1Q96BY2 351 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 C5orf34Q96MH7 638 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 NXF5Q9H1B4 397 aaKnown RBP15.22■□□□□ 0.03
LINC00398-201ENST00000414407 FOLH1BQ9HBA9 442 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 SIRT3Q9NTG7 399 aaPredicted RBP15.22■□□□□ 0.03
LINC00398-201ENST00000414407 PCDHGB4Q9UN71 923 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 TRIM33Q9UPN9 1127 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 ERVK-11Q9UQG0 969 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 SPTA1P02549 2419 aa15.22■□□□□ 0.03
LINC00398-201ENST00000414407 CNTRLQ7Z7A1 2325 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 A0A0G2JND7 137 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 ERN1O75460 977 aaKnown RBP15.21■□□□□ 0.03
LINC00398-201ENST00000414407 SLC25A12O75746 678 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 C6orf47O95873 294 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 PGRP06401 933 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 PHC1P78364 1004 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 ZCCHC12Q6PEW1 402 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 IL20RBQ6UXL0 311 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 RTL4Q6ZR62 310 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 MSANTD1Q6ZTZ1 278 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 NUP43Q8NFH3 380 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 SFXN5Q8TD22 340 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 HOXB13Q92826 284 aaPredicted RBP15.21■□□□□ 0.03
LINC00398-201ENST00000414407 SPACA9Q96E40 222 aaPredicted RBP15.21■□□□□ 0.03
LINC00398-201ENST00000414407 THOC1Q96FV9 657 aaKnown RBP15.21■□□□□ 0.03
LINC00398-201ENST00000414407 CHMP6Q96FZ7 201 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 MARK4Q96L34 752 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 MS4A4EQ96PG1 132 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 TIMMDC1Q9NPL8 285 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 BTNL2Q9UIR0 455 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 NPFFR2Q9Y5X5 522 aa15.21■□□□□ 0.03
LINC00398-201ENST00000414407 FAM234BA2RU67 622 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 CFLARO15519 480 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 NME2P1O60361 137 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 SOX30O94993 753 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 CT45A8P0DMV1 189 aa15.2■□□□□ 0.02
LINC00398-201ENST00000414407 CT45A9P0DMV2 189 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms