RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 HCFC2Q9Y5Z7 792 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 CSNK1G3Q9Y6M4 447 aa13.76□□□□□ -0.21
SEMA3F-202ENST00000413852 CPSF4LA6NMK7 179 aaKnown RBP13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 SLC30A4O14863 429 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 TMPRSS11DO60235 418 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 NR2F1P10589 423 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 KCNJ5P48544 419 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 TMEM201Q5SNT2 666 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 HENMT1Q5T8I9 393 aaKnown RBP13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 NXPE4Q6UWF7 544 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 FAM83HQ6ZRV2 1179 aaPredicted RBP13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 KLBQ86Z14 1044 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 RASGRP3Q8IV61 690 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 ANKRD53Q8N9V6 530 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 GLYATL1Q969I3 302 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 MYNNQ9NPC7 610 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 TM7SF3Q9NS93 570 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 DKK3Q9UBP4 350 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 MAPRE3Q9UPY8 281 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 ZNF106Q9H2Y7 1883 aaKnown RBP13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 LOC105371267A0A1B0GV96 52 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 FAAHO00519 579 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 SCAMP1O15126 338 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 FAM157BP0CG42 384 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 NR2F6P10588 404 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 SELPP16109 830 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 TBXA2RP21731 343 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 CPN2P22792 545 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 OR10A3P58181 314 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 QSOX2Q6ZRP7 698 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 BBS10Q8TAM1 723 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 C16orf58Q96GQ5 468 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 ZNF354BQ96LW1 612 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 FOPNLQ96NB1 174 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 SLC46A2Q9BY10 475 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 GPBP1L1Q9HC44 474 aaPredicted RBP13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 EVA1BQ9NVM1 165 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 RBFOX1Q9NWB1 397 aaKnown RBP13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 ZSCAN32Q9NX65 697 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 SIRT4Q9Y6E7 314 aaPredicted RBP13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 A0A0B4J203 849 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 A0A1W2PPK0 400 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 H7BY64 318 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 GPR4P46093 362 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 EPHB3P54753 998 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 CLDN2P57739 230 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 POU4F3Q15319 338 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 TCEA2Q15560 299 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 KRT74Q7RTS7 529 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 SYT9Q86SS6 491 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 FAM109AQ8N4B1 249 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 CLDN22Q8N7P3 220 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 NEIL3Q8TAT5 605 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 UFD1Q92890 307 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 TM4SF18Q96CE8 201 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 PRAP1Q96NZ9 151 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 TAC3Q9UHF0 121 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 ZNF222Q9UK12 451 aa13.75□□□□□ -0.21
SEMA3F-202ENST00000413852 LEUTXA8MZ59 168 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 INMT-MINDY4F8WBC2 141 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 ARHGEF9O43307 516 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 ZNF250P15622 560 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 ERP29P30040 261 aaKnown RBP13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 VIPR1P32241 457 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 CCT3P49368 545 aaKnown RBP13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 SMSP52788 366 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 MESP2Q0VG99 397 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 GDPGP1Q6ZNW5 385 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 SLC9B2Q86UD5 537 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 OR11H4Q8NGC9 324 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 RAET1EQ8TD07 263 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 SPRYD4Q8WW59 207 aaPredicted RBP13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 ZFR2Q9UPR6 939 aaKnown RBP13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 LOC105369274A0A096LPK9 316 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 A0A0A6YYJ9 748 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 SOCS6O14544 535 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 PQBP1O60828 265 aaKnown RBP13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 HOXB3P14651 431 aaPredicted RBP13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 GNSP15586 552 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 CCR2P41597 374 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 MTNR1AP48039 350 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 RRAS2P62070 204 aaPredicted RBP13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 KCNC3Q14003 757 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 PIP5KL1Q5T9C9 394 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 OR4N4Q8N0Y3 316 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 OR8H3Q8N146 312 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 FAM26EQ8N5C1 309 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 ANKK1Q8NFD2 765 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 KAT2AQ92830 837 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 TCEAL4Q96EI5 215 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 TRMT61BQ9BVS5 477 aaKnown RBP13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 EXTL2Q9UBQ6 330 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 SCN5AQ14524 2016 aa13.74□□□□□ -0.21
SEMA3F-202ENST00000413852 MANSC4A6NHS7 340 aaPredicted RBP13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 A8MVJ9 347 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 GABRPO00591 440 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 PDPK1O15530 556 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 PIP5K1CO60331 668 aa13.73□□□□□ -0.21
SEMA3F-202ENST00000413852 NOS1APO75052 506 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms