RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CTHRC1Q96CG8 243 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 OMA1Q96E52 524 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 C11orf24Q96F05 449 aaPredicted RBP9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 LCORQ96JN0 433 aaPredicted RBP9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 RILPQ96NA2 401 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 NODALQ96S42 347 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 DMRTA2Q96SC8 542 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 SLC6A15Q9H2J7 730 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 TUBB1Q9H4B7 451 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 MIEF1Q9NQG6 463 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 PLSCR2Q9NRY7 297 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 SENP1Q9P0U3 644 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 SPRR3Q9UBC9 169 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 BAIAP2L1Q9UHR4 511 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 LGALS13Q9UHV8 139 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 MID2Q9UJV3 735 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 CFL2Q9Y281 166 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 CCL27Q9Y4X3 112 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 POLEQ07864 2286 aa9.34□□□□□ -0.91
NCKIPSD-202ENST00000413374 SVILO95425 2214 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 LRRK2Q5S007 2527 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 ICE1Q9Y2F5 2266 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 ESPNB1AK53 854 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 RGS14O43566 566 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 AKAP10O43572 662 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 UGT2B11O75310 529 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 TRIM3O75382 744 aaPredicted RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 PPM1BO75688 479 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 RSL1D1O76021 490 aaKnown RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 CLDN14O95500 239 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 IGHG3P01860 377 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 PRF1P14222 555 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 MPIP34949 423 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 PPICP45877 212 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 MASP1P48740 699 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 NUP107P57740 925 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 NAA20P61599 178 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 ZNF630Q2M218 657 aaPredicted RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 HYAL4Q2M3T9 481 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 KRT71Q3SY84 523 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 GALNTL6Q49A17 601 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 RFTN2Q52LD8 501 aaPredicted RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 SH2D4BQ5SQS7 431 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 TMEM211Q6ICI0 200 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 TMEM107Q6UX40 140 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 WDR53Q7Z5U6 358 aaPredicted RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 DND1Q8IYX4 353 aaKnown RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 FAM9CQ8IZT9 166 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 RIBC1Q8N443 379 aaPredicted RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 LIX1Q8N485 282 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 OR4N2Q8NGD1 307 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 CA5BP1Q8WTZ4 195 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 TMBIM1Q969X1 311 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 ANGPTL4Q9BY76 406 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 UCK2Q9BZX2 261 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 TP63Q9H3D4 680 aaPredicted RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 CENPHQ9H3R5 247 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 GLIPR2Q9H4G4 154 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 METTL7AQ9H8H3 244 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 LRTM1Q9HBL6 345 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 GALNT9Q9HCQ5 603 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 SIRT5Q9NXA8 310 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 COQ3Q9NZJ6 369 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 PRODH2Q9UF12 536 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 GIMAP2Q9UG22 337 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 EXO1Q9UQ84 846 aaKnown RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 SLC6A5Q9Y345 797 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 TRAF6Q9Y4K3 522 aa9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 KLF2Q9Y5W3 355 aaPredicted RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 USP9YO00507 2555 aaPredicted RBP9.33□□□□□ -0.92
NCKIPSD-202ENST00000413374 C15orf38-AP3S2A0A0A6YYH1 394 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 A0A1B0GVC2 190 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 ANKRD33BA6NCL7 494 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 NKX2-6A6NCS4 301 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 FAM90A27PA6NNH2 459 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 MYO1GB0I1T2 1018 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 H3BQF6 201 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 AQP7O14520 342 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 BCKDKO14874 412 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 PIP5K1BO14986 540 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 HNRNPRO43390 633 aaKnown RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 SUSD5O60279 629 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 ICOSLGO75144 302 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 BCAS2O75934 225 aaPredicted RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 SNX4O95219 450 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 CHEK2O96017 543 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 ENDOUP21128 410 aaKnown RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 DRD5P21918 477 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 MC3RP41968 323 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 KIR3DL1P43629 444 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 TMED10P49755 219 aaKnown RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 CORO7P57737 925 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 RPL38P63173 70 aaKnown RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 RPP38P78345 283 aaKnown RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 KIAA0040Q15053 153 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 EIPR1Q53HC9 387 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 WIPI1Q5MNZ9 446 aaPredicted RBP9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 WLSQ5T9L3 541 aa9.32□□□□□ -0.92
NCKIPSD-202ENST00000413374 FNDC7Q5VTL7 733 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms