RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 C1orf123Q9NWV4 160 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 BARHL2Q9NY43 387 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 NUDT4Q9NZJ9 180 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 THYN1Q9P016 225 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 GHRLQ9UBU3 117 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 SEC14L4Q9UDX3 406 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZNF346Q9UL40 294 aaKnown RBP3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 MGAT4AQ9UM21 535 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 FBXO7Q9Y3I1 522 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 PARD3Q8TEW0 1356 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 SYNJ2O15056 1496 aa3.98□□□□□ -1.77
HMGB3P31-201ENST00000413333 A0A0A6YYD4 124 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 TTC26A0AVF1 554 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 MEX3AA1L020 520 aaKnown RBP3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 TRIM49BA6NDI0 452 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 IMPA2O14732 288 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 IDH3BO43837 385 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 SLC35G4P0C7Q5 338 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 FAM200BP0CF97 657 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 OXTRP30559 389 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 CYLC1P35663 651 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 HNMTP50135 292 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 SLC7A2P52569 658 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 ARFIP1P53367 373 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 GSCP56915 257 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 GSTO1P78417 241 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 MRPS6P82932 125 aaKnown RBP3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 BNIP1Q12981 228 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZNF146Q15072 292 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 TPD52L1Q16890 204 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 MS4A18Q3C1V0 323 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZNF311Q5JNZ3 666 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 WDR25Q64LD2 544 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 NIPAL3Q6P499 406 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 CES3Q6UWW8 571 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZNF562Q6V9R5 426 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 CARM1Q86X55 608 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 CCDC71Q8IV32 467 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 UNC5CLQ8IV45 518 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 EFCAB13Q8IY85 973 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 ZNRF1Q8ND25 227 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 DENND6BQ8NEG7 585 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 OR1B1Q8NGR6 318 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 OR2T34Q8NGX1 318 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 C11orf52Q96A22 123 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 NABP1Q96AH0 204 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 SLC25A36Q96CQ1 311 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 TBCDQ9BTW9 1192 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 GPR174Q9BXC1 333 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 RAB33BQ9H082 229 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 PARLQ9H300 379 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 RNF41Q9H4P4 317 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 MOB1AQ9H8S9 216 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 COG4Q9H9E3 785 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 ADGRL4Q9HBW9 690 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 THAP10Q9P2Z0 257 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 EMCNQ9ULC0 261 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 RNF115Q9Y4L5 304 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 ATAD2BQ9ULI0 1458 aa3.97□□□□□ -1.77
HMGB3P31-201ENST00000413333 IGHV4-30-2A0A087WSY4 118 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 ARHGEF33A8MVX0 844 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 GPR89AB7ZAQ6 455 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 ALOX15BO15296 676 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 EDIL3O43854 480 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 ZG16O60844 167 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 SDC3O75056 442 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 MFN2O95140 757 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 PRAMEF12O95522 483 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 IGSF6O95976 241 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 CSF2P04141 144 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 KRT8P05787 483 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 GPR89BP0CG08 455 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 CLUP10909 449 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 FOSL2P15408 326 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 DRD5P21918 477 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 SAA4P35542 130 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 ATP12AP54707 1039 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 SRPXP78539 464 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 SLC36A3Q495N2 470 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 DMKNQ6E0U4 476 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 PNCKQ6P2M8 343 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 SLC39A4Q6P5W5 647 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 CBLN3Q6UW01 205 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 APOOLQ6UXV4 268 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 RGS9BPQ6ZS82 235 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 MOB2Q70IA6 237 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 CENPUQ71F23 418 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 NUFIP2Q7Z417 695 aaKnown RBP3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 FAM131BQ86XD5 332 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 CBWD2Q8IUF1 395 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 Q8NBF4 154 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 FBXO30Q8TB52 745 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 BIRC7Q96CA5 298 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 C4orf36Q96KX1 117 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 PRICKLE1Q96MT3 831 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 MYCBPQ99417 103 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 CABLES2Q9BTV7 478 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 CALHM2Q9HA72 323 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 KLRF1Q9NZS2 232 aa3.96□□□□□ -1.78
HMGB3P31-201ENST00000413333 PURGQ9UJV8 347 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms